CX300169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_BRUSU (Chaperone protein clpB OS=Brucella suis GN=clpB PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.257e-42 Identity = 83/121 (68.60%), Postives = 102/121 (84.30%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDD 363 GKTEL+KALA ++F + A+VRIDMSE+MEKH++ RLIGAPPGYVGYEE G LTE VRRRPY VIL DEI+KAH DVFNV+L LDDGR+TD QG T F NTVIIMTSN+G++Y++++ + Sbjct: 610 GKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEYLVNLGE 730
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNE7 (Chaperone protein clpB 2 OS=Synechococcus elongatus (strain PCC 7942) GN=clpB2 PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.257e-42 Identity = 81/122 (66.39%), Postives = 102/122 (83.61%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDDE 366 GKTEL++ALA +F E+AL+R DMSEYMEK++I RLIGAPPGY+GYEE GQL+E +RR PY V+L DE++KAH DVFN++L LDDGR+TDSQG T F N VI+MTSN+GSQ+IL+M +E Sbjct: 622 GKTELARALANCLFDAEDALIRFDMSEYMEKNSISRLIGAPPGYIGYEEGGQLSEAIRRHPYAVVLFDEVEKAHPDVFNLLLQVLDDGRITDSQGRTIDFCNAVIVMTSNIGSQFILEMGEE 743
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_RHOPA (Chaperone protein clpB OS=Rhodopseudomonas palustris GN=clpB PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 1.642e-42 Identity = 83/121 (68.60%), Postives = 101/121 (83.47%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDD 363 GKTEL+KALA Y+F E A+VRIDMSE+MEKH++ RLIGAPPGYVGY+E G LTE VRRRPY VIL DEI+KAH DVFNV+L LDDGR+TD QG T F NT+I+MTSN+GS+Y+++ + Sbjct: 611 GKTELTKALAEYLFDDETAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTSNLGSEYLVNQPE 731
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_RHILO (Chaperone protein clpB OS=Rhizobium loti GN=clpB PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 1.642e-42 Identity = 81/122 (66.39%), Postives = 103/122 (84.43%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDDE 366 GKTEL+KALA ++F + A+VRIDMSE+MEKH++ RLIGAPPGYVGYEE G LTE VRRRPY V+L DEI+KAH DVFNV+L LDDGR+TD QG T F NT+IIMTSN+G++Y++++ ++ Sbjct: 610 GKTELTKALASFLFDDDSAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNLGAEYLVNLGED 731
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_BRUME (Chaperone protein clpB OS=Brucella melitensis GN=clpB PE=3 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 1.642e-42 Identity = 83/121 (68.60%), Postives = 102/121 (84.30%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDD 363 GKTEL+KALA ++F + A+VRIDMSE+MEKH++ RLIGAPPGYVGYEE G LTE VRRRPY VIL DEI+KAH DVFNV+L LDDGR+TD QG T F NTVIIMTSN+G++Y++++ + Sbjct: 610 GKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGHTVDFRNTVIIMTSNLGAEYLVNLGE 730
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_BRAJA (Chaperone protein clpB OS=Bradyrhizobium japonicum GN=clpB PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 2.144e-42 Identity = 82/121 (67.77%), Postives = 101/121 (83.47%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDD 363 GKTEL+KALA Y+F E A+VR+DMSEYMEKH++ RLIGAPPGYVGY+E G LTE VRRRPY V+L DEI+KAH DVFNV+L LDDGR+TD QG T F NT+IIMTSN+GS+++++ + Sbjct: 611 GKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNLGSEFLVNQPE 731
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_RHIME (Chaperone protein clpB OS=Rhizobium meliloti GN=clpB PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 3.657e-42 Identity = 83/116 (71.55%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTEL+KALA ++F E AL+RIDMSEYMEKH++ RLIGAPPGYVGYEE G LTE VRRRPY V+L DEI+KAH DVFNV+L LDDGR+TD QG T F NT+IIMTSN+G++Y+ Sbjct: 612 GKTELTKALARFLFDDETALMRIDMSEYMEKHSVARLIGAPPGYVGYEEGGALTESVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTMIIMTSNLGAEYL 727
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_PSESM (Chaperone protein clpB OS=Pseudomonas syringae pv. tomato GN=clpB PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 3.657e-42 Identity = 83/119 (69.75%), Postives = 100/119 (84.03%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDM 357 GKTEL KALA ++F TEEA+VRIDMSE+MEKH++ RLIGAPPGYVGYEE G LTE VRR+PY VIL DE++KAHSDVFN++L L+DGR+TDS G T F NTVI+MTSN+GS I ++ Sbjct: 610 GKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL 728
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_TREPA (Chaperone protein clpB OS=Treponema pallidum GN=clpB PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 4.776e-42 Identity = 82/117 (70.09%), Postives = 96/117 (82.05%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYIL 351 GKTEL++ LA ++F E AL RIDMSEYMEKHAI RLIGAPPGYVGY+E GQLTE VRRRPY V+L DE++KAH DVFN+ L LDDGR+TD QG F NT+IIMTSN+GS++IL Sbjct: 614 GKTELARTLADFLFNDERALTRIDMSEYMEKHAISRLIGAPPGYVGYDEGGQLTEAVRRRPYSVLLFDEVEKAHQDVFNIFLQILDDGRLTDGQGRVVDFRNTIIIMTSNIGSEHIL 730
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_STRCO (Chaperone protein clpB OS=Streptomyces coelicolor GN=clpB PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 4.776e-42 Identity = 78/118 (66.10%), Postives = 100/118 (84.75%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL+KALA ++F E A+VRIDMSEY EKH++ RL+GAPPGYVGYEE GQLTE VRRRPY V+L DE++KAH +VF+++L LDDGR+TD QG T F NT++++TSN+GSQY++D Sbjct: 614 GKTELAKALADFLFDDERAMVRIDMSEYSEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYTVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNTILVLTSNLGSQYLVD 731 The following BLAST results are available for this feature:
BLAST of CX300169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300169 ID=CX300169; Name=CX300169; organism=Citrus clementina; type=EST; length=367bpback to top |