CX300169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_SALTI (Chaperone protein clpB OS=Salmonella typhi GN=clpB PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 2.370e-41 Identity = 81/116 (69.83%), Postives = 97/116 (83.62%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTEL KALA +MF +++A+VRIDMSE+MEKH++ RL+GAPPGYVGYEE G LTE VRRRPY VIL DE++KAH DVFN++L LDDGR+TD QG T F NTV+IMTSN+GS I Sbjct: 610 GKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI 725
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_XANCP (Chaperone protein clpB OS=Xanthomonas campestris pv. campestris GN=clpB PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 3.096e-41 Identity = 80/122 (65.57%), Postives = 100/122 (81.97%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDDE 366 GKTEL KALA ++F + EA++RIDMSE+MEKH++ RLIGAPPGYVGYEE G LTE VRRRPY +IL DE++KAH+DVFN++L LDDGR+TD QG T F NTVI+MTSN+GS I ++ + Sbjct: 610 GKTELCKALADFLFDSTEAMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGD 731
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_PROFR (Chaperone protein clpB (Fragment) OS=Propionibacterium freudenreichii subsp. shermanii GN=clpB PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 3.096e-41 Identity = 80/117 (68.38%), Postives = 97/117 (82.91%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYIL 351 GKTEL+KALA ++F E A+VRIDMSEYMEKH++ RL+GAPPGYVGYEE GQLTE VRRRPY V+L DEI+K H DVFN +L LDDGR+TD QG T F N ++IMTSN+GSQ+++ Sbjct: 613 GKTELAKALADFLFDDETAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEIEKVHPDVFNFLLQVLDDGRLTDGQGRTVDFRNVILIMTSNLGSQFMV 729
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_CLOPE (Chaperone protein clpB OS=Clostridium perfringens GN=clpB PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 3.096e-41 Identity = 82/118 (69.49%), Postives = 97/118 (82.20%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL+K LA +F +E+ +VRIDMSEYMEKHA+ RLIG PPGYVGYEE GQLTE VRR PY VIL DEI+KAH DVFN+ L LDDGR+TD++G T F NT+IIMTSN+GS Y+L+ Sbjct: 617 GKTELAKTLARNLFDSEDNIVRIDMSEYMEKHAVSRLIGPPPGYVGYEEGGQLTEAVRRNPYSVILFDEIEKAHDDVFNLFLQILDDGRLTDNKGKTVDFKNTIIIMTSNIGSGYLLE 734
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB1_CHLTE (Probable chaperone protein clpB 1 OS=Chlorobium tepidum GN=clpB1 PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 3.096e-41 Identity = 79/116 (68.10%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTEL++ LA Y+F E+AL+RIDMSEYME H + RL+GAPPGYVGYEE GQLTE VRR+P+ V+L DEI+KAH DVFN++L LDDGR+TDS+G T +F NT+IIMTSN+G+Q I Sbjct: 183 GKTELARTLAEYLFDDEDALIRIDMSEYMEAHTVSRLVGAPPGYVGYEEGGQLTEAVRRKPFSVVLLDEIEKAHPDVFNILLQILDDGRLTDSKGRTVNFKNTIIIMTSNIGAQLI 298
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_YERPE (Chaperone protein clpB OS=Yersinia pestis GN=clpB PE=3 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 4.043e-41 Identity = 80/116 (68.97%), Postives = 97/116 (83.62%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTEL KALA ++F +++A+VRIDMSE+MEKH++ RL+GAPPGYVGYEE G LTE VRRRPY VIL DE++KAH DVFN++L LDDGR+TD QG T F NTV+IMTSN+GS I Sbjct: 610 GKTELCKALATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI 725
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_XANAC (Chaperone protein clpB OS=Xanthomonas axonopodis pv. citri GN=clpB PE=3 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 4.043e-41 Identity = 80/122 (65.57%), Postives = 99/122 (81.15%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDDE 366 GKTEL KALA ++F + EA++RIDMSE+MEKH++ RLIGAPPGYVGYEE G LTE VRRRPY +IL DE++KAH DVFN++L LDDGR+TD QG T F NTVI+MTSN+GS I ++ + Sbjct: 610 GKTELCKALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGD 731
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_SHEON (Chaperone protein clpB OS=Shewanella oneidensis GN=clpB PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 4.043e-41 Identity = 82/116 (70.69%), Postives = 96/116 (82.76%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTEL K+LA ++F +E ALVRIDMSE+MEKHA+ RL+GAPPGYVGYEE G LTE VRR+PY VIL DE++KAH DVFN++L LDDGR+TD QG T F NTVIIMTSN+GS I Sbjct: 610 GKTELCKSLARFLFDSESALVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDII 725
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_CHRVO (Chaperone protein clpB OS=Chromobacterium violaceum GN=clpB PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 4.043e-41 Identity = 82/119 (68.91%), Postives = 97/119 (81.51%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDM 357 GKTEL K LA ++F +++ L+RIDMSEYMEKH++ RLIGAPPGYVGYEE G LTE VRR+PY VIL DE++KAH DVFNV+L LDDGR+TD QG T F NTVI+MTSN+GSQ I M Sbjct: 614 GKTELCKTLASFLFDSKDHLIRIDMSEYMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQQIQAM 732
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_VIBPA (Chaperone protein clpB OS=Vibrio parahaemolyticus GN=clpB PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.281e-41 Identity = 80/116 (68.97%), Postives = 96/116 (82.76%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTEL K LA +MF +E+A+VRIDMSE+MEKH++ RL+GAPPGYVGYEE G LTE VRR+PY VIL DE++KAH DVFN++L LDDGR+TD QG T F NTV+IMTSN+GS I Sbjct: 610 GKTELCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRI 725 The following BLAST results are available for this feature:
BLAST of CX300169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300169 ID=CX300169; Name=CX300169; organism=Citrus clementina; type=EST; length=367bpback to top |