CX300169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_STAES (Chaperone protein clpB OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpB PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.281e-41 Identity = 80/118 (67.80%), Postives = 101/118 (85.59%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL+K+LA +F +E+ ++RIDMSEYMEKHA+ RLIGAPPGYVG++E GQLTE VRR PY VIL DE++KAHSDVFNV+L LD+GR+TDS+G + F NT+IIMTSN+GSQ +L+ Sbjct: 614 GKTELAKSLASSLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQILDEGRLTDSKGRSVDFKNTIIIMTSNIGSQVLLE 731
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_STAEQ (Chaperone protein clpB OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpB PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.281e-41 Identity = 80/118 (67.80%), Postives = 101/118 (85.59%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL+K+LA +F +E+ ++RIDMSEYMEKHA+ RLIGAPPGYVG++E GQLTE VRR PY VIL DE++KAHSDVFNV+L LD+GR+TDS+G + F NT+IIMTSN+GSQ +L+ Sbjct: 614 GKTELAKSLASSLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYVGHDEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQILDEGRLTDSKGRSVDFKNTIIIMTSNIGSQVLLE 731
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_PSEAE (Chaperone protein clpB OS=Pseudomonas aeruginosa GN=clpB PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.281e-41 Identity = 79/119 (66.39%), Postives = 99/119 (83.19%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDM 357 GKTEL KALA ++F TEEALVRIDMSE+MEKH++ RLIGAPPGYVG+EE G LTE +RR+PY V+L DE++KAH DVFN++L L+DGR+TDS G T F NTV++MTSN+GS I ++ Sbjct: 610 GKTELCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYLTEAIRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL 728
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_VIBVY (Chaperone protein clpB OS=Vibrio vulnificus (strain YJ016) GN=clpB PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 6.897e-41 Identity = 80/116 (68.97%), Postives = 96/116 (82.76%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTEL K LA +MF +E+A+VRIDMSE+MEKH++ RL+GAPPGYVGYEE G LTE VRR+PY VIL DE++KAH DVFN++L LDDGR+TD QG T F NTV+IMTSN+GS I Sbjct: 610 GKTELCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRI 725
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_VIBVU (Chaperone protein clpB OS=Vibrio vulnificus GN=clpB PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 6.897e-41 Identity = 80/116 (68.97%), Postives = 96/116 (82.76%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTEL K LA +MF +E+A+VRIDMSE+MEKH++ RL+GAPPGYVGYEE G LTE VRR+PY VIL DE++KAH DVFN++L LDDGR+TD QG T F NTV+IMTSN+GS I Sbjct: 610 GKTELCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRI 725
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNPX (Chaperone protein clpB 2 OS=Synechococcus sp. (strain WH8102) GN=clpB2 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 9.007e-41 Identity = 82/118 (69.49%), Postives = 99/118 (83.90%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL+KALA +F EEALVR+DMSE+ME++A RLIGAPPGYVGYEE GQLTE VRRRPY V+L DE++KAH DVFN++L LDDGR+TDSQGLT F +TV++MTSN+ S IL+ Sbjct: 646 GKTELAKALATSLFDEEEALVRLDMSEFMERNASARLIGAPPGYVGYEEGGQLTEAVRRRPYAVLLLDEVEKAHPDVFNLLLQVLDDGRLTDSQGLTVDFRHTVVVMTSNLASPVILE 763
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_RICFE (Chaperone protein clpB OS=Rickettsia felis GN=clpB PE=3 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 1.176e-40 Identity = 75/122 (61.48%), Postives = 102/122 (83.61%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDDE 366 GKTEL+KALA ++F A++RIDMSEYMEKHAI RLIGAPPGY+GY++ G LTE VRRRPY VIL DE++KAH D+FN++L LD+GR+TDSQG+T F NT+I++TSN+G++ +++ ++ Sbjct: 609 GKTELTKALASFLFDDRNAILRIDMSEYMEKHAISRLIGAPPGYIGYDQGGVLTEAVRRRPYQVILFDEVEKAHPDIFNIMLQILDEGRLTDSQGITVDFKNTIIVLTSNLGAEILVNQKED 730
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_PHOPR (Chaperone protein clpB OS=Photobacterium profundum GN=clpB PE=3 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 1.176e-40 Identity = 81/116 (69.83%), Postives = 95/116 (81.90%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTEL K LA +MF +E+ +VRIDMSE+MEKH++ RL+GAPPGYVGYEE G LTE VRRRPY VIL DE++KAH DVFN++L LDDGR+TD QG T F NTVIIMTSN+GS I Sbjct: 610 GKTELCKTLANFMFDSEDNMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDRI 725
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_CLOTE (Chaperone protein clpB OS=Clostridium tetani GN=clpB PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.176e-40 Identity = 80/122 (65.57%), Postives = 98/122 (80.33%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDDE 366 GKTEL+K L +F +EE ++RIDMSEYMEK+++ RLIGAPPGYVGYEE GQLTE VRR+PY VIL DEI+KAH DVFN+ L LDDGR+TD++G T F N +IIMTSN+GS Y+L+ E Sbjct: 616 GKTELAKTLCKNLFDSEENIIRIDMSEYMEKYSVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKTVDFKNCIIIMTSNIGSSYLLENKKE 737
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_STRAL (Chaperone protein clpB OS=Streptomyces albus G GN=clpB PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.536e-40 Identity = 76/117 (64.96%), Postives = 98/117 (83.76%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYIL 351 GKTEL+KALA ++F E A++RIDMSEY EKH++ RL+GAPPGYVGYEE GQLTE VRRRPY V+L DE++KAH VF+++L LDDGR+TD QG T F NT++++TSN+GSQY++ Sbjct: 610 GKTELAKALADFLFDDERAMIRIDMSEYGEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPGVFDILLQVLDDGRLTDGQGRTVDFRNTILVLTSNLGSQYLV 726 The following BLAST results are available for this feature:
BLAST of CX300169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300169 ID=CX300169; Name=CX300169; organism=Citrus clementina; type=EST; length=367bpback to top |