CX300169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB1_STRAW (Chaperone protein clpB 1 OS=Streptomyces avermitilis GN=clpB1 PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 2.007e-40 Identity = 77/116 (66.38%), Postives = 97/116 (83.62%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTEL+KALA ++F E A+VRIDMSEY EKH + RL+GAPPGYVGYEE GQLTE VRRRPY V+L DE++KAH +VF+++L LDDGR+TD QG T F NT++I+TSN+GSQ++ Sbjct: 614 GKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNTILILTSNLGSQFL 729
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPC_GUITH (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Guillardia theta GN=clpC PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 2.621e-40 Identity = 78/116 (67.24%), Postives = 97/116 (83.62%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTEL+KALA Y F +EEA+VR+DMSEYME+H + +LIG+PPGYVGY E GQLTE VRRRPY V+L DEI+K H DVFN++L L+DGR+TDS+G T F NT++I+TSNVGS+ I Sbjct: 551 GKTELTKALASYFFGSEEAMVRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTESVRRRPYTVVLFDEIEKGHPDVFNLLLQILEDGRLTDSKGRTVDFKNTLLILTSNVGSKVI 666
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPC_CYACA (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Cyanidium caldarium GN=clpC PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 2.621e-40 Identity = 77/116 (66.38%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTEL+KA+A Y F +EEA+VR+DMSEYME+H + +LIG+PPGYVGY E GQLTE VR+RPY V+L DEI+KAH DVFN++L L+DGR+TDS+G T F NT++IMTSN+GS+ I Sbjct: 584 GKTELTKAMASYFFGSEEAMVRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRKRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTIDFKNTLLIMTSNIGSKVI 699
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_CLOAB (Chaperone protein clpB OS=Clostridium acetobutylicum GN=clpB PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 2.621e-40 Identity = 78/118 (66.10%), Postives = 100/118 (84.75%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL+K LA MF +E+ ++RIDMSEYMEK+++ RLIG+PPGYVGYEE GQLTE VRR+PY VIL DEI+KAHSDVFN+ L DDGR+TD++G T F N++IIMTSN+GS+++L+ Sbjct: 616 GKTELAKTLARVMFDSEDNIIRIDMSEYMEKYSVSRLIGSPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHSDVFNIFLQIFDDGRLTDNKGNTIDFKNSIIIMTSNIGSEHLLN 733
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_HAEDU (Chaperone protein clpB OS=Haemophilus ducreyi GN=clpB PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 3.423e-40 Identity = 78/116 (67.24%), Postives = 95/116 (81.90%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTELSK LA ++F E A+VRIDMSE+MEKH++ RL+GAPPGYVGYE+ G LTE VRRRPY V+L DE++KAH DVFN++L LDDGR+TD QG T F NTV+IMTSN+G+ I Sbjct: 610 GKTELSKTLANFLFDDENAIVRIDMSEFMEKHSVSRLVGAPPGYVGYEQGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGAHLI 725
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_RICPR (Chaperone protein clpB OS=Rickettsia prowazekii GN=clpB PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 4.470e-40 Identity = 75/121 (61.98%), Postives = 101/121 (83.47%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDD 363 GKTEL+KALA ++F AL+RIDMSEYMEKH+I RLIGAPPGY+GY++ G LTE VRRRPY VIL DE++KAH D+FN++L LD+GR+TDSQG+T F NT+I++TSN+G++ +++ + Sbjct: 609 GKTELTKALAGFLFDDRNALLRIDMSEYMEKHSISRLIGAPPGYIGYDQGGVLTESVRRRPYQVILFDEVEKAHLDIFNIMLQILDEGRLTDSQGITVDFKNTIIVLTSNLGAEILVNQKE 729
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_BACTN (Chaperone protein clpB OS=Bacteroides thetaiotaomicron GN=clpB PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 4.470e-40 Identity = 76/116 (65.52%), Postives = 96/116 (82.76%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTEL+KALA ++F E + RIDMSEY EKH++ RL+GAPPGYVGY+E GQLTE +RR+PY V+L DEI+KAH DVFN++L LDDGR+TD++G +F NT+IIMTSN+GS YI Sbjct: 608 GKTELAKALAEFLFDDESMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSSYI 723
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_WOLSU (Chaperone protein clpB OS=Wolinella succinogenes GN=clpB PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 5.838e-40 Identity = 76/122 (62.30%), Postives = 100/122 (81.97%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDDE 366 GKT+ +K LA ++F +++ LVRIDMSEYMEKHA RL+GAPPGYVGYEE GQLTE +RR+PY V+L DEI+KAH DVFN++L LDDGR+TD++G+T F NT+II+TSN+ S I++ D+ Sbjct: 613 GKTQSAKTLAKFLFDSDKNLVRIDMSEYMEKHAASRLVGAPPGYVGYEEGGQLTEAIRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGVTVDFRNTIIILTSNIASDKIMENSDK 734
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_RICTY (Chaperone protein clpB OS=Rickettsia typhi GN=clpB PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 7.625e-40 Identity = 74/122 (60.66%), Postives = 102/122 (83.61%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDDE 366 GKTEL+KALA ++F AL+RIDMSEYMEKH+I RLIGAPPGY+GY++ G LTE VRRRPY VIL DE++KAH D+FN++L LD+GR+T+SQG+T F NT+I++TSN+G++ +++ ++ Sbjct: 609 GKTELTKALAGFLFDDRNALLRIDMSEYMEKHSISRLIGAPPGYIGYDQGGVLTESVRRRPYQVILFDEVEKAHLDIFNIMLQILDEGRLTNSQGITVDFKNTIIVLTSNLGAEILVNQQED 730
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: HS101_ORYSJ (Heat shock protein 101 OS=Oryza sativa subsp. japonica GN=HSP101 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 9.959e-40 Identity = 81/117 (69.23%), Postives = 96/117 (82.05%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYIL 351 GKTEL+KALA +F E LVRIDMSEYME+H++ RLIGAPPGYVG+EE GQLTE VRRRPY VIL DE++KAH VFN +L LDDGR+TD QG T F NTVIIMTSN+G++++L Sbjct: 612 GKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLL 728 The following BLAST results are available for this feature:
BLAST of CX300169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300169 ID=CX300169; Name=CX300169; organism=Citrus clementina; type=EST; length=367bpback to top |