CX300180
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300180 vs. ExPASy Swiss-Prot
Match: PSBO_CHLRE (Oxygen-evolving enhancer protein 1, chloroplastic OS=Chlamydomonas reinhardtii GN=PSBO PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.008e-39 Identity = 81/137 (59.12%), Postives = 94/137 (68.61%), Query Frame = 1 Query: 1 GTANQCPTIDGGVDSFA-FKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDP 408 G AN CP ++ G + K G Y+ + FC+EPTSFTVK ES K +F TKLMTRLTYTLD + G F+V DG+ + E DGIDYAA TVQLPGGERV FLFTIKQ G + G+FLVPSYRGSSFLDP Sbjct: 69 GIANTCPVLESGTTNLKELKAGSYKLENFCIEPTSFTVKEESQFKGGETEFVKTKLMTRLTYTLDAMSGSFKVGSDGSAELKEDDGIDYAATTVQLPGGERVAFLFTIKQFDGKGTLDGIKGDFLVPSYRGSSFLDP 205
BLAST of CX300180 vs. ExPASy Swiss-Prot
Match: PSBO_EUGGR (Oxygen-evolving enhancer protein 1, chloroplastic OS=Euglena gracilis GN=PSBO PE=1 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 2.324e-36 Identity = 77/137 (56.20%), Postives = 90/137 (65.69%), Query Frame = 1 Query: 1 GTANQCPTIDGGVDS-FAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDP 408 G A CP + GV S + K GKY+ +CLEP+SF VK K +F+ TKLMTRLTYTLD I V DG+ EKDG+DYAA TVQL GGERVPFLFTIK L+A G F G+F VPSYRG++FLDP Sbjct: 113 GIAGTCPVLADGVSSKLSLKAGKYEINNWCLEPSSFQVKLPPTEKQQVTEFERTKLMTRLTYTLDAISADLNVGGDGSWTIQEKDGLDYAATTVQLAGGERVPFLFTIKNLLAKGDAGQFLGQFDVPSYRGATFLDP 249
BLAST of CX300180 vs. ExPASy Swiss-Prot
Match: PSBO_ANASP (Photosystem II manganese-stabilizing polypeptide OS=Anabaena sp. (strain PCC 7120) GN=psbO PE=3 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 7.736e-32 Identity = 73/148 (49.32%), Postives = 94/148 (63.51%), Query Frame = 1 Query: 1 GTANQCP----TIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKP--------ENFGGEFLVPSYRGSSFLDP 408 G AN+CP T G + + K Y K+ CLEPT+F VK E NK +F KL+TR T T+D++ G + + D ++ FVEKDG+D+ A+TVQLPGGERVPFLFTIK LVA +P +F G F VPSYRG++FLDP Sbjct: 42 GLANKCPQLTETSRGSIPLDSSK--SYVLKELCLEPTNFFVKEEPANKRQTAEFVAGKLLTRYTSTIDQVSGDLKFNDDSSLTFVEKDGLDFQAITVQLPGGERVPFLFTIKNLVAQTQPGLSSLNTSTDFEGTFKVPSYRGAAFLDP 187
BLAST of CX300180 vs. ExPASy Swiss-Prot
Match: PSBO_THEEB (Photosystem II manganese-stabilizing polypeptide OS=Thermosynechococcus elongatus (strain BP-1) GN=psbO PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.940e-31 Identity = 70/146 (47.95%), Postives = 97/146 (66.44%), Query Frame = 1 Query: 1 GTANQCPTIDGGV-DSFAFKPGK-YQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPE--------NFGGEFLVPSYRGSSFLDP 408 G AN+CPT+D ++ + Y+ + CL+PT+F VK E NK +F TKL+TR T +LD+I+G +V+ DG++ FVE+DGID+ VTVQ+ GGER+P LFT+K LVAS +P +F GEF VPSYR ++FLDP Sbjct: 40 GLANKCPTLDDTARGAYPIDSSQTYRIARLCLQPTTFLVKEEPKNKRQEAEFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDP 185
BLAST of CX300180 vs. ExPASy Swiss-Prot
Match: PSBO_SYNEN (Photosystem II manganese-stabilizing polypeptide OS=Synechococcus elongatus naegeli GN=psbO PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.940e-31 Identity = 70/146 (47.95%), Postives = 97/146 (66.44%), Query Frame = 1 Query: 1 GTANQCPTIDGGV-DSFAFKPGK-YQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPE--------NFGGEFLVPSYRGSSFLDP 408 G AN+CPT+D ++ + Y+ + CL+PT+F VK E NK +F TKL+TR T +LD+I+G +V+ DG++ FVE+DGID+ VTVQ+ GGER+P LFT+K LVAS +P +F GEF VPSYR ++FLDP Sbjct: 40 GLANKCPTLDDTARGAYPIDSSQTYRIARLCLQPTTFLVKEEPKNKRQEAEFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDP 185
BLAST of CX300180 vs. ExPASy Swiss-Prot
Match: PSBO_CYAA5 (Photosystem II manganese-stabilizing polypeptide OS=Cyanothece sp. (strain ATCC 51142) GN=psbO PE=3 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 3.042e-28 Identity = 68/146 (46.58%), Postives = 87/146 (59.59%), Query Frame = 1 Query: 1 GTANQCPTIDGGV-DSFAFKPGK-YQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPE--------NFGGEFLVPSYRGSSFLDP 408 G AN+CP I S +PG+ Y CLEP + VK E VNK ++ KL+TR T +L++I G V DG + F E+ GID+ VTVQLPGGE+VPF FTIK LV +P +F G+F VPSYRG++FLDP Sbjct: 43 GLANKCPQISEFTRGSIPIEPGQTYFVDDLCLEPQEYFVKEEPVNKRQEAEYVPGKLLTRYTTSLEQISGKITVDEDGVVTFYEEGGIDFQPVTVQLPGGEQVPFFFTIKNLVGKTEPGFSSINSSIDFEGDFRVPSYRGATFLDP 188
BLAST of CX300180 vs. ExPASy Swiss-Prot
Match: PSBO_SYNY3 (Photosystem II manganese-stabilizing polypeptide OS=Synechocystis sp. (strain PCC 6803) GN=psbO PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.363e-27 Identity = 64/146 (43.84%), Postives = 84/146 (57.53%), Query Frame = 1 Query: 1 GTANQCPTIDGGV-DSFAFKPG-KYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKP--------ENFGGEFLVPSYRGSSFLDP 408 G AN CP I + +P KY FC+EP + VK E VNK ++ K++TR T +L++I G V DGT+ F EKDGID+ +TV LPGGE VPF FT+K + +P +F G+F VPSYRG+ FLDP Sbjct: 43 GLANVCPEISSFTRGTIEVEPNTKYFVSDFCMEPQEYFVKEEPVNKRQKAEYVKGKVLTRQTTSLEQIRGSIAVGADGTLTFKEKDGIDFQPITVLLPGGEEVPFFFTVKNFTGTTEPGFTSINSSTDFVGDFNVPSYRGAGFLDP 188
BLAST of CX300180 vs. ExPASy Swiss-Prot
Match: PSBO_SYNE7 (Photosystem II manganese-stabilizing polypeptide OS=Synechococcus elongatus (strain PCC 7942) GN=psbO PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.112e-25 Identity = 64/146 (43.84%), Postives = 84/146 (57.53%), Query Frame = 1 Query: 1 GTANQCPTI-DGGVDSFAFKPGK-YQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVAS--------GKPENFGGEFLVPSYRGSSFLDP 408 G AN+C ++ + + + GK Y CLEP F VK E NK +F K++TR T +LD++ G + DGT+ F EK GID+ A+TV LPGGE VPFLFT+K LVAS + G + VPSYR S+FLDP Sbjct: 42 GLANKCLSLKESARGTIPLEAGKKYALTDLCLEPQEFFVKEEPGNKRQKAEFVPGKVLTRYTSSLDQVYGDLALKADGTVSFTEKGGIDFQAITVLLPGGEEVPFLFTVKGLVASTSEPATSINTSTDLRGGYRVPSYRTSNFLDP 187
BLAST of CX300180 vs. ExPASy Swiss-Prot
Match: PSBO_POPEU (Oxygen-evolving enhancer protein 1, chloroplastic (Fragments) OS=Populus euphratica GN=PSBO PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.265e-14 Identity = 42/71 (59.15%), Postives = 44/71 (61.97%), Query Frame = 1 Query: 112 KAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIK 324 KAE +NKN+PPDFQ TKLMTR DGIDYAAVTVQLPGGERVPFLFTIK Sbjct: 10 KAEGINKNSPPDFQKTKLMTR-------------------------DGIDYAAVTVQLPGGERVPFLFTIK 55 The following BLAST results are available for this feature:
BLAST of CX300180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300180 ID=CX300180; Name=CX300180; organism=Citrus clementina; type=EST; length=410bpback to top |