CX300181
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300181 vs. ExPASy Swiss-Prot
Match: TRXH3_ARATH (Thioredoxin H-type 3 OS=Arabidopsis thaliana GN=TRX3 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 6.295e-34 Identity = 65/103 (63.11%), Postives = 86/103 (83.50%), Query Frame = 3 Query: 72 AEEGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEEL 380 A EG+VI CHTVE W E+L+ +NE+K+L+V+DFTA+WC PCRFIAP A+LAKK +V+F KVDVDEL +VA ++ V+AMPTF+F+KEG+I + VVGA KEE+ Sbjct: 2 AAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEI 104
BLAST of CX300181 vs. ExPASy Swiss-Prot
Match: TRXH_WHEAT (Thioredoxin H-type OS=Triticum aestivum PE=1 SV=3) HSP 1 Score: 141.739 bits (356), Expect = 1.074e-33 Identity = 65/108 (60.19%), Postives = 84/108 (77.78%), Query Frame = 3 Query: 57 AEMAAAEEGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEEL 380 A AA G+VI H++E W Q++++N K+LVV+DFTASWCGPCR +AP A+LAKK P +FLKVDVDELK +A ++VEAMPTF+F+KEG + D+VVGA KEEL Sbjct: 10 ATAAAVGAGEVISVHSLEQWTMQIEEANAAKKLVVIDFTASWCGPCRIMAPIFADLAKKFPAAVFLKVDVDELKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAIKEEL 117
BLAST of CX300181 vs. ExPASy Swiss-Prot
Match: TRXH2_BRANA (Thioredoxin H-type 2 OS=Brassica napus GN=THL-2 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.831e-33 Identity = 64/108 (59.26%), Postives = 86/108 (79.63%), Query Frame = 3 Query: 69 AAEEGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKK-LPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQT 389 AAEEGQVIGCH ++ W QL + ++ +L+V+DFTASWC PCR IAP A+LAKK + + +F KVDVDEL++VA ++ VEAMPTF+ +K+G +VDKVVGA+KE+L T Sbjct: 2 AAEEGQVIGCHEIDVWAVQLDTAKQSNKLIVIDFTASWCPPCRMIAPVFADLAKKFMSSAIFFKVDVDELQNVAQEFGVEAMPTFVLIKDGNVVDKVVGARKEDLHAT 109
BLAST of CX300181 vs. ExPASy Swiss-Prot
Match: TRXH_BRARA (Thioredoxin H-type OS=Brassica rapa GN=PEC-2 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.475e-30 Identity = 63/111 (56.76%), Postives = 84/111 (75.68%), Query Frame = 3 Query: 63 MAAAEE----GQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQ 383 MAA E G+VI CHTVE WN +L+ + E+ +L+V+DFTA WC PCRFIAP ELAKK +V+F KVDVDEL +VA ++ V+AMPTF+++K + +DKVVGA KEE++ Sbjct: 1 MAATAELIPAGEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAKEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIE 111
BLAST of CX300181 vs. ExPASy Swiss-Prot
Match: TRXH_BRAOL (Thioredoxin H-type OS=Brassica oleracea GN=BOPC17 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.475e-30 Identity = 63/111 (56.76%), Postives = 84/111 (75.68%), Query Frame = 3 Query: 63 MAAAEE----GQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQ 383 MAA E G+VI CHTVE WN +L+ + E+ +L+V+DFTA WC PCRFIAP ELAKK +V+F KVDVDEL +VA ++ V+AMPTF+++K + +DKVVGA KEE++ Sbjct: 1 MAATAEVIPAGEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIE 111
BLAST of CX300181 vs. ExPASy Swiss-Prot
Match: TRXH1_BRANA (Thioredoxin H-type 1 OS=Brassica napus GN=THL-1 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.475e-30 Identity = 63/111 (56.76%), Postives = 84/111 (75.68%), Query Frame = 3 Query: 63 MAAAEE----GQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQ 383 MAA E G+VI CHTVE WN +L+ + E+ +L+V+DFTA WC PCRFIAP ELAKK +V+F KVDVDEL +VA ++ V+AMPTF+++K + +DKVVGA KEE++ Sbjct: 1 MAATAEVIPAGEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIE 111
BLAST of CX300181 vs. ExPASy Swiss-Prot
Match: TRXH9_ARATH (Thioredoxin H-type 9 OS=Arabidopsis thaliana GN=TRX9 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.527e-23 Identity = 44/95 (46.32%), Postives = 71/95 (74.74%), Query Frame = 3 Query: 102 TVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQ 386 T E+W+++L +++ ++VV +F+A+WCGPC+ +APF EL++K +++FL VDVDEL ++ W ++A PTF FLK G+ + K+VGA K ELQ+ Sbjct: 30 TKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQK 124
BLAST of CX300181 vs. ExPASy Swiss-Prot
Match: TRXH_POPJC (Thioredoxin H-type OS=Populus jackii PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.232e-22 Identity = 42/95 (44.21%), Postives = 69/95 (72.63%), Query Frame = 3 Query: 102 TVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQ 386 T E W+++L +++ ++V+ +F+A WCGPC+ IAP+ EL++ P+++FL +DVDEL + W ++A PTF FL++G+ VDK+VGA K EL + Sbjct: 31 TKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGANKPELHK 125
BLAST of CX300181 vs. ExPASy Swiss-Prot
Match: TRXH2_ARATH (Thioredoxin H-type 2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 1.231e-21 Identity = 46/105 (43.81%), Postives = 72/105 (68.57%), Query Frame = 3 Query: 72 AEEGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQ 386 +E +V+ + W + E+ +L+VVDF+ASWCGPCR I P + +A K +V F+K+DVDEL VA ++ V AMPTF+ +K GK +++++GAKK+EL++ Sbjct: 22 SEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEK 126
BLAST of CX300181 vs. ExPASy Swiss-Prot
Match: THIO_HORSE (Thioredoxin OS=Equus caballus GN=TXN PE=3 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 1.778e-20 Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = 3 Query: 111 AWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQT 389 A+ E L + E +LVVVDF+A+WCGPC+ I PF L++K NV+FL+VDVD+ + VA + V+ MPTF F K+G+ VD+ GA KE+L+ T Sbjct: 10 AFQEALNSAGE--KLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVAAECEVKCMPTFQFFKKGQKVDEFSGANKEKLEAT 100 The following BLAST results are available for this feature:
BLAST of CX300181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300181 ID=CX300181; Name=CX300181; organism=Citrus clementina; type=EST; length=390bpback to top |