CX300181
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300181 vs. ExPASy Swiss-Prot
Match: THIO_STAHJ (Thioredoxin OS=Staphylococcus haemolyticus (strain JCSC1435) GN=trxA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.772e-12 Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 3 Query: 159 VVDFTASWCGPCRFIAPFLAELAKKLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEE 377 +VDF A+WCGPC+ IAP L ELA LK+DVDE S A + V ++PT + K+G+ VDKVVG + +E Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKFEVMSIPTLIVFKDGEPVDKVVGFQPKE 94
BLAST of CX300181 vs. ExPASy Swiss-Prot
Match: TRXF_BRANA (Thioredoxin F-type, chloroplastic OS=Brassica napus GN=TRXF PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.155e-11 Identity = 31/79 (39.24%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 147 KQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVD-ELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEEL 380 +++VV+D WCGPC+ IAP L++K +V+FLK+D + E + +A + + +PTF LK+ ++V +V GAK ++L Sbjct: 90 EKIVVLDMYTQWCGPCKVIAPKYKALSEKYEDVVFLKLDCNPENRPLAKELGIRVVPTFKILKDNQVVKEVTGAKYDDL 168
BLAST of CX300181 vs. ExPASy Swiss-Prot
Match: TRX2_SCHPO (Thioredoxin-2, mitochondrial OS=Schizosaccharomyces pombe GN=trx2 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.509e-11 Identity = 28/77 (36.36%), Postives = 50/77 (64.94%), Query Frame = 3 Query: 150 QLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEEL 380 ++ VVDF A WCGPC+++ PFL +L+++ F+ V+ D+ +A V A+PT + ++G+ +D++VGA + L Sbjct: 36 KVTVVDFYADWCGPCKYLKPFLEKLSEQNQKASFIAVNADKFSDIAQKNGVYALPTMVLFRKGQELDRIVGADVKTL 112
BLAST of CX300181 vs. ExPASy Swiss-Prot
Match: TR548_MIMIV (Thioredoxin-like protein R548 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R548 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.509e-11 Identity = 31/86 (36.05%), Postives = 52/86 (60.47%), Query Frame = 3 Query: 138 NETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDV--DELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQT 389 +E+K LV++DF +WCGPC+ IAP +A+K P V F K++ + L ++ + ++PTF F K GK + + V A L+++ Sbjct: 46 DESKGLVIIDFFTTWCGPCKRIAPDYIRMAEKYPTVSFYKINAENENLANIVAACEIVSLPTFCFFKAGKYIGRFVNADPVGLEKS 131
BLAST of CX300181 vs. ExPASy Swiss-Prot
Match: THIO1_CORNE (Thioredoxin C-1 OS=Corynebacterium nephridii PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.509e-11 Identity = 35/90 (38.89%), Postives = 54/90 (60.00%), Query Frame = 3 Query: 102 TVEAWNEQLQKSN-ETKQLVVVDFTASWCGPCRFIAPFLAELAKKLP-NVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGA 365 TV+ N Q ++ + VVVDF A WCGPC+ IAP L E+A ++ V KV++DE +A + V ++PT + K+G++ +VGA Sbjct: 2 TVKVDNSNFQSDVLQSSEPVVVDFWAEWCGPCKMIAPALDEIATEMAGQVKIAKVNIDENPELAAQFGVRSIPTLLMFKDGELAANMVGA 91
BLAST of CX300181 vs. ExPASy Swiss-Prot
Match: TRXM_SPIOL (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 1.970e-11 Identity = 30/76 (39.47%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 141 ETKQLVVVDFTASWCGPCRFIAPFLAELAKKLP-NVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGA 365 E++ V+VDF A WCGPC+ IAP + ELAK+ + K++ DE +AT + + ++PT +F K G+ + ++GA Sbjct: 90 ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGA 165
BLAST of CX300181 vs. ExPASy Swiss-Prot
Match: TRXF_SPIOL (Thioredoxin F-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 1.970e-11 Identity = 32/76 (42.11%), Postives = 51/76 (67.11%), Query Frame = 3 Query: 156 VVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVD-ELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEEL 380 VV+D WCGPC+ +AP +LA++ +V+FLK+D + E K++A + + +PTF LKE +V +V GAK ++L Sbjct: 105 VVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKL 180
BLAST of CX300181 vs. ExPASy Swiss-Prot
Match: THIO_LISMO (Thioredoxin OS=Listeria monocytogenes GN=trxA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.970e-11 Identity = 32/80 (40.00%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 153 LVVVDFTASWCGPCRFIAPFLAELAKKLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAK-KEELQQ 386 LV+ DF A+WCGPCR +AP L E+ ++ L +K+DVDE + V ++PT + K+G++V+ ++G + KEEL + Sbjct: 18 LVLTDFWATWCGPCRMVAPVLEEIQEERGEALKIVKMDVDENPETPGSFGVMSIPTLLIKKDGEVVETIIGYRPKEELDE 97
BLAST of CX300181 vs. ExPASy Swiss-Prot
Match: THIO_LISIN (Thioredoxin OS=Listeria innocua GN=trxA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.970e-11 Identity = 32/80 (40.00%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 153 LVVVDFTASWCGPCRFIAPFLAELAKKLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAK-KEELQQ 386 LV+ DF A+WCGPCR +AP L E+ ++ L +K+DVDE + V ++PT + K+G++V+ ++G + KEEL + Sbjct: 18 LVLTDFWATWCGPCRMVAPVLEEIQEERGEALKIVKMDVDENPETPGSFGVMSIPTLLIKKDGEVVETIIGYRPKEELDE 97
BLAST of CX300181 vs. ExPASy Swiss-Prot
Match: THIO_CHLLT (Thioredoxin OS=Chlorobium limicola f.sp. thiosulfatophilum GN=trxA PE=1 SV=5) HSP 1 Score: 67.781 bits (164), Expect = 1.970e-11 Identity = 29/76 (38.16%), Postives = 50/76 (65.79%), Query Frame = 3 Query: 141 ETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPN-VLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGA 365 ++ + V+VDF ASWCGPC + P + +LA + K++VDE ++A + + ++PT + +K GK+VD++VGA Sbjct: 18 DSDKAVLVDFWASWCGPCMMLGPVIEQLADDYEGKAIIAKLNVDENPNIAGQYGIRSIPTMLIIKGGKVVDQMVGA 93 The following BLAST results are available for this feature:
BLAST of CX300181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300181 ID=CX300181; Name=CX300181; organism=Citrus clementina; type=EST; length=390bpback to top |