CX300185
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300185 vs. ExPASy Swiss-Prot
Match: G3PB_ARATH (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Arabidopsis thaliana GN=GAPB PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 4.003e-23 Identity = 49/81 (60.49%), Postives = 59/81 (72.84%), Query Frame = 3 Query: 12 AQEVNAAFTESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWHDNEWGYSQRVVDLADIVANNW 254 A++VN AF ++A+ +KGIL VCD PLVSVDFRC MGDDMVKV+AW+DNEWGYSQRVVDLA +VA+ W Sbjct: 338 AEDVNEAFRKAANGPMKGILDVCDAPLVSVDFRCSDVSTTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASKW 418
BLAST of CX300185 vs. ExPASy Swiss-Prot
Match: G3PA_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Gracilaria verrucosa GN=GAPA PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.424e-20 Identity = 44/85 (51.76%), Postives = 58/85 (68.24%), Query Frame = 3 Query: 3 KTFAQEVNAAFTESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWHDNEWGYSQRVVDLADIVANNWK 257 KTF +EVN A ++A+ +KGI+ DEPLVS D+R MGDDM+KV+AW+DNEWGYSQRVVDL +++A+ WK Sbjct: 332 KTFKEEVNGALLKAANGSMKGIIKYSDEPLVSCDYRGTDESTIIDSSLTMVMGDDMLKVVAWYDNEWGYSQRVVDLGEVMASQWK 416
BLAST of CX300185 vs. ExPASy Swiss-Prot
Match: G3PA_CHOCR (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Chondrus crispus GN=GAPA PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 7.067e-20 Identity = 43/85 (50.59%), Postives = 56/85 (65.88%), Query Frame = 3 Query: 3 KTFAQEVNAAFTESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWHDNEWGYSQRVVDLADIVANNWK 257 KTF +EVN A ++++ +KGI+ DEPLVS D R MGDDM+KV+AW+DNEWGYSQRVVDL +++A WK Sbjct: 330 KTFKEEVNGALLKASEGAMKGIIKYSDEPLVSCDHRGTDESTIIDSSLTMVMGDDMIKVVAWYDNEWGYSQRVVDLGEVMARQWK 414
BLAST of CX300185 vs. ExPASy Swiss-Prot
Match: G3P2_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Synechocystis sp. (strain PCC 6803) GN=gap2 PE=1 SV=3) HSP 1 Score: 94.3597 bits (233), Expect = 2.056e-19 Identity = 47/84 (55.95%), Postives = 54/84 (64.29%), Query Frame = 3 Query: 6 TFAQEVNAAFTESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWHDNEWGYSQRVVDLADIVANNWK 257 T A++VN E+A+ LKG+L D LVS DFR MG DMVKVIAW+DNEWGYSQRVVDLA+IVA NWK Sbjct: 254 TIAEQVNGVLKEAANTSLKGVLEYTDLELVSSDFRGTDCSSTVDGSLTMVMGGDMVKVIAWYDNEWGYSQRVVDLAEIVAKNWK 337
BLAST of CX300185 vs. ExPASy Swiss-Prot
Match: G3PA_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Scenedesmus vacuolatus GN=GapA PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.629e-16 Identity = 39/68 (57.35%), Postives = 46/68 (67.65%), Query Frame = 3 Query: 3 KTFAQEVNAAFTESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWHDNEWG 206 KTFA+E+N AF E+A L G+L+V DEPLVSVDFRC MG DMVKV+AW+DNEWG Sbjct: 247 KTFAEEINNAFKEAAAGSLNGVLAVSDEPLVSVDFRCTDVSSTIDSSLTMVMGADMVKVVAWYDNEWG 314
BLAST of CX300185 vs. ExPASy Swiss-Prot
Match: G3P2_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap2 PE=3 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 1.056e-15 Identity = 38/84 (45.24%), Postives = 54/84 (64.29%), Query Frame = 3 Query: 3 KTFAQEVNAAFTESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWHDNEWGYSQRVVDLADIVANNW 254 +T +EVN A ++++ LKGIL + LVS D++ MG+D+VKV+AW+DNEWGYSQRV+DLA++VA W Sbjct: 253 RTITEEVNQALKDASEGPLKGILDYSELQLVSSDYQGTDASSIVDASLTLVMGNDLVKVMAWYDNEWGYSQRVLDLAELVAEKW 336
BLAST of CX300185 vs. ExPASy Swiss-Prot
Match: G3P2_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena sp. (strain PCC 7120) GN=gap2 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.056e-15 Identity = 38/84 (45.24%), Postives = 54/84 (64.29%), Query Frame = 3 Query: 3 KTFAQEVNAAFTESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWHDNEWGYSQRVVDLADIVANNW 254 +T +EVN A ++++ LKGIL + LVS D++ MG+D+VKV+AW+DNEWGYSQRV+DLA++VA W Sbjct: 253 RTITEEVNQALKDASEGPLKGILDYSELQLVSSDYQGTDASSIVDANLTLVMGNDLVKVMAWYDNEWGYSQRVLDLAELVAEKW 336
BLAST of CX300185 vs. ExPASy Swiss-Prot
Match: G3P1_BACCE (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus cereus GN=gap1 PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 3.756e-13 Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = 3 Query: 15 QEVNAAFTESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWHDNEWGYSQRVVDLA 233 +EVNAAF +A+ ELKGIL +EPLVS+D+ M +MVKV++W+DNE GYS RVVDLA Sbjct: 254 EEVNAAFKAAAEGELKGILGYSEEPLVSIDYNGCTASSTIDALSTMVMEGNMVKVLSWYDNETGYSNRVVDLA 326
BLAST of CX300185 vs. ExPASy Swiss-Prot
Match: G3P1_BACSU (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus subtilis GN=gapA PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.905e-13 Identity = 39/78 (50.00%), Postives = 48/78 (61.54%), Query Frame = 3 Query: 12 AQEVNAAFTESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWHDNEWGYSQRVVDLADIVA 245 A+EVNAA E+A+ +LKGIL +EPLVS D+ M MVKVI+W+DNE GYS RVVDLA +A Sbjct: 254 AEEVNAALKEAAEGDLKGILGYSEEPLVSGDYNGNKNSSTIDALSTMVMEGSMVKVISWYDNESGYSNRVVDLAAYIA 331
BLAST of CX300185 vs. ExPASy Swiss-Prot
Match: G3P2_BACSU (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Bacillus subtilis GN=gapB PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.093e-12 Identity = 38/82 (46.34%), Postives = 45/82 (54.88%), Query Frame = 3 Query: 12 AQEVNAAFTESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWHDNEWGYSQRVVDLADIVANNWK 257 A+EVN AF +A + G+L DEPLVS D+ M D VKV+AW+DNEWGYS RVVDL VA K Sbjct: 254 AEEVNEAFKRAAKTSMYGVLDYSDEPLVSTDYNTNPHSAVIDGLTTMVMEDRKVKVLAWYDNEWGYSCRVVDLIRHVAARMK 335 The following BLAST results are available for this feature:
BLAST of CX300185 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300185 ID=CX300185; Name=CX300185; organism=Citrus clementina; type=EST; length=430bpback to top |