CX300193
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3PC_CHOCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Chondrus crispus GN=GAPC PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.510e-17 Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 325 V+P L GKL G+A RVPTP+ + +T E++ A + +AD+ +KGI+ ++ +VS DF + K++AWYDNEWGYS RVVDL Sbjct: 220 VMPELNGKLTGMAFRVPTPDVSVVDLTVRLASETTYEDIKATMKAAADDSMKGIMKYTEDAVVSTDFIHDDASCIFDASAGIMLNSKFCKLVAWYDNEWGYSNRVVDL 327
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3PP_RALEH (Glyceraldehyde-3-phosphate dehydrogenase, plasmid OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbGP PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.809e-17 Identity = 48/114 (42.11%), Postives = 63/114 (55.26%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 343 V+P L G+L+G A+RVPT N ++ T EEVN + +A+ ELKGIL PLVSVDF G +VKV AWYDNEWG+S R++D A +A+ Sbjct: 222 VMPELDGRLDGFAVRVPTINVSLVDLSFVAARPTTVEEVNGILKAAAEGELKGILDYNTAPLVSVDFNHNPASSTFDATLTKVNG-TLVKVSAWYDNEWGFSNRMLDTAVALAH 334
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3PC_RALEH (Glyceraldehyde-3-phosphate dehydrogenase, chromosomal OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbGC PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.809e-17 Identity = 48/114 (42.11%), Postives = 63/114 (55.26%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 343 V+P L G+L+G A+RVPT N ++ T EEVN + +A+ ELKGIL PLVSVDF G +VKV AWYDNEWG+S R++D A +A+ Sbjct: 222 VMPELDGRLDGFAVRVPTINVSLVDLSFVAARPTTVEEVNGILKAAAEGELKGILDYNTAPLVSVDFNHNPASSTFDATLTKVNG-TLVKVSAWYDNEWGFSNRMLDTAVALAH 334
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus GN=Gapdh PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 1.281e-16 Identity = 42/114 (36.84%), Postives = 62/114 (54.39%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 343 V+P L GKL G+A RVPTPN K +++ +++++ LKGIL ++ +VS DF + D+ VK+I+WYDNE+GYS RVVDL +A+ Sbjct: 218 VIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSNSHSSTFDAGAGIALNDNFVKLISWYDNEYGYSNRVVDLMAYMAS 331
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_MASBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Mastigamoeba balamuthi GN=GAPD PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.281e-16 Identity = 45/108 (41.67%), Postives = 58/108 (53.70%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 325 V+P LKG+L G++ RVPT N EE+ A RE+A+ ELKG+L DE +VS DF + VK+++WYDNEWGYS RVVDL Sbjct: 224 VIPELKGRLTGMSFRVPTLNVSVVDLTAELKTPATYEEICNAVREAANGELKGVLGYTDEQVVSSDFVGEPMSSIFDAKAGIALDKTFVKLVSWYDNEWGYSNRVVDL 331
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_USTMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ustilago maydis GN=GAPD PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 1.673e-16 Identity = 42/113 (37.17%), Postives = 62/113 (54.87%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 340 V+P+L GKL G+A RVPT N K +E+ A + +++NELKGIL ++ +VS DF + ++ VK+++WYDNEWGYS R +DL +A Sbjct: 220 VIPSLNGKLTGMAFRVPTTNVSVVDLTARLEKGASYDEIKAEVKRASENELKGILGYTEDAVVSQDFIGNSHSSIFDAAAGISLNNNFVKLVSWYDNEWGYSNRCLDLLVFMA 332
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_ZYGRO (Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosaccharomyces rouxii PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.185e-16 Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 346 VLP+L+GKL G+A RVPT + +K+T +E+ AA +++++ +KGIL ++ +VS DF + VK+++WYDNE+GYS RVVDL + VA + Sbjct: 218 VLPSLQGKLTGMAFRVPTVDVSVVDLTVNLAKETSYDEIKAALKKASEGSMKGILGYTEDDVVSSDFLGDAHSSIVDAAAGIQLTPTFVKLVSWYDNEFGYSTRVVDLVEHVAKS 332
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_SHEEP (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Ovis aries GN=GAPDH PE=2 SV=4) HSP 1 Score: 84.3445 bits (207), Expect = 2.185e-16 Identity = 42/108 (38.89%), Postives = 58/108 (53.70%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 325 V+P L GKL G+A RVPTPN K +E+ +++++ LKGIL ++ +VS DF + D VK+I+WYDNE+GYS RVVDL Sbjct: 207 VIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAKYDEIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDL 314
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_SCHCO (Glyceraldehyde-3-phosphate dehydrogenase OS=Schizophyllum commune GN=GPD PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.185e-16 Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 325 V+P+L G+L G+A RVPT + K+ +E+ A +E+++ LKGIL DE +VS DF + VK+IAWYDNEWGYS+RV DL Sbjct: 219 VIPSLNGRLTGLAFRVPTLDVSVVDLVVRLEKEASYDEIVATVKEASEGPLKGILGFTDESVVSTDFTGANESSIFDSKAGIAISKSFVKLIAWYDNEWGYSRRVCDL 326
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_LENED (Glyceraldehyde-3-phosphate dehydrogenase OS=Lentinula edodes GN=gpd PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.185e-16 Identity = 44/108 (40.74%), Postives = 59/108 (54.63%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 325 V+P+L GKL G+A RVPT + K +E+ AA +E++ LKGIL ++ +VS DF + + VK+IAWYDNEWGYS RVVDL Sbjct: 219 VIPSLNGKLTGLAFRVPTLDVSVVDLVCRTEKSATYDEIKAAVKEASKGPLKGILGYTEDHVVSTDFIGDNHSSIFDATAGIQLNKNFVKLIAWYDNEWGYSGRVVDL 326 The following BLAST results are available for this feature:
BLAST of CX300193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300193 ID=CX300193; Name=CX300193; organism=Citrus clementina; type=EST; length=430bpback to top |