CX300193
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3PC_ORYSI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Oryza sativa subsp. indica GN=GAPC PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.854e-16 Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 325 VLP L GKL G++ RVPT + K + + +A + +++ +LKGI+ +E LVS DF + D+ VK++AWYDNEWGYS RV+DL Sbjct: 222 VLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWGYSNRVIDL 329
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P2_CANGA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Candida glabrata GN=GPD2 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.854e-16 Identity = 42/115 (36.52%), Postives = 64/115 (55.65%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 346 VLP L+GKL G+A RVPT + K+T +E+ +++++ +LKG+L ++ +VS DF + VK+++WYDNE+GYS RVVDL + VA N Sbjct: 218 VLPQLQGKLTGMAFRVPTVDVSVVDLTVKLQKETTYDEIKKVIKQASEGKLKGVLGYTEDAVVSSDFLGDSRSSIFDASAGIQLSPKFVKLVSWYDNEYGYSTRVVDLVEHVAKN 332
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_MUSPF (Glyceraldehyde-3-phosphate dehydrogenase OS=Mustela putorius furo GN=GAPDH PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.727e-16 Identity = 42/114 (36.84%), Postives = 61/114 (53.51%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 343 V+P L GKL G+A RVPTPN K +++ +++++ LKGIL ++ +VS DF + D VK+I+WYDNE+GYS RVVDL +A+ Sbjct: 218 VIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVYMAS 331
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_CHICK (Glyceraldehyde-3-phosphate dehydrogenase OS=Gallus gallus GN=GAPDH PE=2 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 3.727e-16 Identity = 42/108 (38.89%), Postives = 57/108 (52.78%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 325 V+P L GKL G+A RVPTPN K +++ + +AD LKGIL ++ +VS DF + D VK+++WYDNE+GYS RVVDL Sbjct: 218 VIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAKYDDIKRVVKAAADGPLKGILGYTEDQVVSCDFNGDSHSSTFDAGAGIALNDHFVKLVSWYDNEFGYSNRVVDL 325
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_CANFA (Glyceraldehyde-3-phosphate dehydrogenase OS=Canis familiaris GN=GAPDH PE=2 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 3.727e-16 Identity = 42/114 (36.84%), Postives = 61/114 (53.51%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 343 V+P L GKL G+A RVPTPN K +++ +++++ LKGIL ++ +VS DF + D VK+I+WYDNE+GYS RVVDL +A+ Sbjct: 218 VIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVYMAS 331
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_BORBU (Glyceraldehyde-3-phosphate dehydrogenase OS=Borrelia burgdorferi GN=gap PE=1 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 3.727e-16 Identity = 45/111 (40.54%), Postives = 63/111 (56.76%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFA-EEVNAAFRESADN-ELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 328 VLP LKGKLNG ++RVP P KK EE+N+ R++++ ELKGIL ++P+VS D + + + K+++WYDNE+GYS RVVDLA Sbjct: 220 VLPELKGKLNGTSMRVPVPTGSIVDLTVQLKKKDVTKEEINSVLRKASETPELKGILGYTEDPIVSSDIKGNSHSSIVDGLETMVLENGFAKILSWYDNEFGYSTRVVDLA 330
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_SPECI (Glyceraldehyde-3-phosphate dehydrogenase OS=Spermophilus citellus GN=GAPDH PE=2 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 4.868e-16 Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 325 V+P L GKL G+A RVPTPN K +++ +++++ LKGIL ++ +VS DF + D VK+I+WYDNE+GYS RVVDL Sbjct: 218 VIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDL 325
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_SCHMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.868e-16 Identity = 44/108 (40.74%), Postives = 60/108 (55.56%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 325 V+PAL GKL G+A RVPTP+ K EE+ AA + +A LKGIL ++ +VS DF + ++ VK+++WYDNE+GYS RVVDL Sbjct: 221 VIPALNGKLTGMAFRVPTPDVSVVDLTCRLGKGASYEEIKAAVKAAASGPLKGILEYTEDEVVSSDFVGSTSSSIFDAKAGISLNNNFVKLVSWYDNEFGYSCRVVDL 328
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_RABIT (Glyceraldehyde-3-phosphate dehydrogenase OS=Oryctolagus cuniculus GN=GAPDH PE=1 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 4.868e-16 Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 325 V+P L GKL G+A RVPTPN K +++ +++++ LKGIL ++ +VS DF + D VK+I+WYDNE+GYS RVVDL Sbjct: 218 VIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSATHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDL 325
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_PIG (Glyceraldehyde-3-phosphate dehydrogenase OS=Sus scrofa GN=GAPDH PE=1 SV=4) HSP 1 Score: 83.1889 bits (204), Expect = 4.868e-16 Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 325 V+P L GKL G+A RVPTPN K +++ +++++ LKGIL ++ +VS DF + D VK+I+WYDNE+GYS RVVDL Sbjct: 218 VIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDL 325 The following BLAST results are available for this feature:
BLAST of CX300193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300193 ID=CX300193; Name=CX300193; organism=Citrus clementina; type=EST; length=430bpback to top |