CX300193
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3PG_LEIME (Glyceraldehyde-3-phosphate dehydrogenase, glycosomal OS=Leishmania mexicana GN=GAPG PE=1 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 2.416e-15 Identity = 44/117 (37.61%), Postives = 61/117 (52.14%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF----RCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 340 V+P+ KGKL G++ RVPTP+ ++ T +E++ A +++A +KGIL DE LVS DF R KV++WYDNEW YS RVVDL +A Sbjct: 236 VIPSTKGKLTGMSFRVPTPDVSVVDLTFRATRDTSIQEIDKAIKKAAQTYMKGILGFTDEELVSADFINDNRSSVYDSKATLQNNLPGEKRFFKVVSWYDNEWAYSHRVVDLVRYMA 352
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3PC_PETHY (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petunia hybrida GN=GAPC PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.416e-15 Identity = 43/114 (37.72%), Postives = 62/114 (54.39%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 343 VLPAL GKL G+A RVPT + K+ +E+ AA +E ++ +LKGI ++ +VS DF + + VK+++WYDNE GYS RVVDL +A+ Sbjct: 222 VLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKEATYDEIKAAIKEESEGKLKGIPGHTEDDVVSTDFIGDNRSSIFDAKAGIALSKNFVKLVSWYDNEMGYSTRVVDLIKHIAS 335
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_PICPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia pastoris GN=GPD PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 3.155e-15 Identity = 42/113 (37.17%), Postives = 61/113 (53.98%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 340 V+P L GKL G+A RVPT + K+T EE+ + + +++ +LKG+L ++ +VS DF + VK+I+WYDNE+GYS RVVDL VA Sbjct: 219 VIPELNGKLTGLAFRVPTVDVSVVDLTVNLKKETTYEEIKSVIKAASEGKLKGVLGYTEDAVVSSDFLGDERSSIFDASAGIQLTPSFVKLISWYDNEYGYSTRVVDLLQHVA 331
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_MESAU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mesocricetus auratus GN=GAPDH PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 3.155e-15 Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRV 316 V+P L GKL G+A RVPTPN K E++ +++++ LKGIL ++ +VS DF+ + D+ VK+I+WYDNE+GYS RV Sbjct: 208 VIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYEDIKKVVKQASEGPLKGILGYTEDQVVSCDFKSDSHSSTFDAGAGIALNDNFVKLISWYDNEFGYSNRV 312
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_ECHMU (Glyceraldehyde-3-phosphate dehydrogenase OS=Echinococcus multilocularis PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 3.155e-15 Identity = 44/109 (40.37%), Postives = 60/109 (55.05%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNE-LKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 325 V+P L GKL G+A RVPTPN SK +++ AA + ++++ LK IL ++ +VS DF + D VK+IAWYDNE+GYS RVVDL Sbjct: 219 VIPELNGKLTGMAFRVPTPNVSVVDLTCKLSKPATYDQIKAAVKRASESSALKRILEYTEDQVVSTDFLSTTCSSTFDARAGIALNDTFVKLIAWYDNEFGYSCRVVDL 327
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_HAEIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Haemophilus influenzae GN=gapA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 4.121e-15 Identity = 43/119 (36.13%), Postives = 61/119 (51.26%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESAD-----NELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 343 VLPAL GKL G+A RVPTPN K + + A +++A+ ELKG+L ++ +VS DF + D VK+++WYDNE GYS +V+DL + N Sbjct: 218 VLPALNGKLTGMAFRVPTPNVSVVDLTVNLEKPASYDAIKQAIKDAAEGKTFNGELKGVLGYTEDAVVSTDFNGCALTSVFDADAGIALTDSFVKLVSWYDNETGYSNKVLDLVAHIYN 336
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_YARLI (Glyceraldehyde-3-phosphate dehydrogenase OS=Yarrowia lipolytica GN=GPD PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.382e-15 Identity = 45/114 (39.47%), Postives = 62/114 (54.39%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADN-ELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 340 V+P L GKL G++LRVPT + E++ A + ++++ ELKGIL DE +VS DF + D+ VK+I+WYDNE+GYS RVVDL VA Sbjct: 219 VIPELNGKLTGMSLRVPTVDVSVVDLTVRIKNGASYEDIKATMKAASESPELKGILGYTDEDVVSTDFIGDTHSSIFDAKAGIGLNDNFVKLISWYDNEYGYSARVVDLIVAVA 332
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3PT_BOVIN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Bos taurus GN=GAPDHS PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.382e-15 Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 325 V+P LKGKL G+A RVPTP+ ++ T + A + +A + GIL+ ++ +VS DF + D+ VK+I+WYDNE+GYS RVVDL Sbjct: 279 VIPDLKGKLTGMAFRVPTPDVSVVDLTCRLAQPTPYSAIKDAIKAAAKGPMAGILAYTEDEVVSTDFLSDTHSSIFDAKAGIALNDNFVKLISWYDNEYGYSNRVVDL 386
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P3_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhizomucor racemosus GN=GPD3 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.382e-15 Identity = 44/114 (38.60%), Postives = 62/114 (54.39%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNE-LKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 340 V+P L GKL G+A RVPTP+ K +E+ A ++++++E LKGIL ++ +VS DF + VK+I+WYDNE+GYS RVVDL VA Sbjct: 220 VIPELNGKLTGMAFRVPTPDVSVVDLTVRLEKPASYDEIKATIKKASESEELKGILGYTEDQVVSTDFVGDAHSSIFDAKAGIQLSPTFVKLISWYDNEFGYSTRVVDLLAYVA 333
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_CRYCU (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus curvatus GN=GPD PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 7.029e-15 Identity = 40/117 (34.19%), Postives = 62/117 (52.99%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 352 V+P+L GKL G++ R+PT + K +++ +++++ ELKGIL ++ +VS DF + D VK+I+WYDNE+GYS+RV DL VA K Sbjct: 219 VIPSLNGKLTGMSFRIPTSDVSVVDLVVRLEKGASYDQIKEVIKKASEGELKGILGYTEDEVVSTDFLGSTESSVFDAKAGIPLNDKFVKLISWYDNEYGYSRRVCDLIAYVAKKDK 335 The following BLAST results are available for this feature:
BLAST of CX300193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300193 ID=CX300193; Name=CX300193; organism=Citrus clementina; type=EST; length=430bpback to top |