CX300193
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_PONAB (Glyceraldehyde-3-phosphate dehydrogenase OS=Pongo abelii GN=GAPDH PE=2 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 4.556e-14 Identity = 39/108 (36.11%), Postives = 55/108 (50.93%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 325 V+P L GKL G+A RVPT N K +++ +++++ LKGIL + +VS D + D VK+I+WYDNE+GYS RVVDL Sbjct: 220 VIPELNGKLTGMAFRVPTANVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDLNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDL 327
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_LYOSH (Glyceraldehyde-3-phosphate dehydrogenase OS=Lyophyllum shimeji GN=GPD PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.951e-14 Identity = 38/108 (35.19%), Postives = 55/108 (50.93%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 325 V+P+L GKL G++ RVPT + K E++ +E+++ KGI+ +E +VS DF + + VK+I WYDNEWGYS RV DL Sbjct: 218 VIPSLNGKLTGLSFRVPTIDVSVIDLVVRLEKPASYEDIKKTVKEASEGAYKGIIEYTEEQVVSADFIGHHASSIFDAQAGIQLNPNFVKLIVWYDNEWGYSARVCDL 325
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_BUCAI (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=gapA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.951e-14 Identity = 39/113 (34.51%), Postives = 57/113 (50.44%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 340 VLP L GKL G+A RVP N K E+ ++++ E+KGI+ ++ +VS DF + + VK+IAWYDNE GYS +V+DL +V+ Sbjct: 218 VLPNLNGKLTGMAFRVPVSNVSVVDLTVRYKKSATYSEICQKIQQASQKEMKGIMGYTEDEVVSTDFNGEELTSIFDAKAGLSLNKNFVKLIAWYDNETGYSSKVLDLVSLVS 330
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_CORGL (Glyceraldehyde-3-phosphate dehydrogenase OS=Corynebacterium glutamicum GN=gap PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 7.772e-14 Identity = 42/114 (36.84%), Postives = 60/114 (52.63%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 343 VLP LKGKL+G ALRVP + E +NAA +E+A E L+ +EPLVS D + + VKV++WYDNEWGY+ +++ L ++VA+ Sbjct: 220 VLPELKGKLDGYALRVPVITGSATDLTFNTKSEVTVESINAAIKEAAVGEFGETLAYSEEPLVSTDI-VHDSHGSIFDAGLTKVSGNTVKVVSWYDNEWGYTCQLLRLTELVAS 332
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3PG_TRYBB (Glyceraldehyde-3-phosphate dehydrogenase, glycosomal OS=Trypanosoma brucei brucei PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 7.772e-14 Identity = 41/112 (36.61%), Postives = 58/112 (51.79%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF----RCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 325 V+P+ +GKL G+A RVPT + ++ T +E++AA + ++ +K IL DE LVS DF R K+++WYDNEWGYS RVVDL Sbjct: 235 VIPSTQGKLTGMAFRVPTADVSVVDLTFIATRDTSIKEIDAALKRASKTYMKNILGYTDEELVSADFISDSRSSIYDSKATLQNNLPNERRFFKIVSWYDNEWGYSHRVVDL 346
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P2_DROSU (Glyceraldehyde-3-phosphate dehydrogenase 2 (Fragment) OS=Drosophila subobscura GN=Gapdh2 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.772e-14 Identity = 40/98 (40.82%), Postives = 51/98 (52.04%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNE 295 V+PAL GKL G+A RVPTPN K +E+ A +E+A+ LKGIL DE +VS DF + D VK+I+WYDNE Sbjct: 207 VIPALNGKLTGMAFRVPTPNVSVVDLTVRLGKGASYDEIKAKVQEAANGPLKGILGYTDEEVVSTDFLSDTHSSVFDAKAGISLNDKFVKLISWYDNE 304
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_RALSO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ralstonia solanacearum GN=gapA PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 1.015e-13 Identity = 36/113 (31.86%), Postives = 58/113 (51.33%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 340 V+P L KL G++ RVPT + K +E+ A + + LKG+L ++ +V+ DFR + +KV++WYDNEWGYS +V+++A +VA Sbjct: 219 VIPQLNKKLTGMSFRVPTSDVSVVDLTVELEKAASYDEICAEMKAQSQGALKGVLGYTEDKVVATDFRGDARTSIFDAEAGIALDGTFIKVVSWYDNEWGYSNKVLEMARVVA 331
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: E4PD_PSEA6 (D-erythrose-4-phosphate dehydrogenase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=epd PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.731e-13 Identity = 39/108 (36.11%), Postives = 52/108 (48.15%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 325 VLP GK IA+RVPT N K ++VN A + + L GIL +EPLVSVDF +VK++ W DNEWG+S R++D+ Sbjct: 221 VLPKFAGKFEAIAVRVPTINVSAMDLSVTLDAKVTIDDVNQALKTVKNGRLNGILDFTEEPLVSVDFNHDAHSCIVDGTQTRVSHKQLVKLLVWCDNEWGFSNRMIDI 328
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_CRYNE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus neoformans GN=GPD PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.261e-13 Identity = 39/114 (34.21%), Postives = 62/114 (54.39%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADN-ELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 340 V+P+L GKL G++ RVPT + K EE+ ++++++ ELKGIL ++ +VS DF + + VK+++WYDNE+GYS+RV DL +A Sbjct: 219 VIPSLNGKLTGMSFRVPTSDVSVVDLVCRIEKGASYEEIKNVIKKASESPELKGILGYTEDAVVSTDFIGSTESSIFDAQAGIALNANFVKLVSWYDNEYGYSRRVCDLISYIA 332
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_AQUAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Aquifex aeolicus GN=gap PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.261e-13 Identity = 47/121 (38.84%), Postives = 62/121 (51.24%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKK-TFAEEVNAAFRESADNE-------LKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 340 V+P LKGKL+G A RVP P+ +K + EEVN FRE+A LK IL C++P+VS D + D++V + AWYDNEWGYS R+ DL +A Sbjct: 219 VIPELKGKLDGTARRVPVPDGSLIDLTVVVNKAPSSVEEVNEKFREAAQKYRESGKVYLKEILQYCEDPIVSTDI-VGNPHSAIFDAPLTQVIDNLVHIAAWYDNEWGYSCRLRDLVIYLA 338 The following BLAST results are available for this feature:
BLAST of CX300193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300193 ID=CX300193; Name=CX300193; organism=Citrus clementina; type=EST; length=430bpback to top |