CX300193
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_STRAU (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces aureofaciens GN=gap PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.953e-13 Identity = 41/113 (36.28%), Postives = 58/113 (51.33%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 340 VLP L GKL+G ++RVP P ++ +EV A+R +A L G+L ++PLVS D G +KV+AWYDNEWG+S RV+D ++A Sbjct: 219 VLPNLDGKLSGDSIRVPVPVGSIVELNTTVARDVTRDEVLDAYRAAAQGPLAGVLEYSEDPLVSSDITGNPASSIFDSELTRVDGRH-IKVVAWYDNEWGFSNRVIDTLQLLA 330
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_CHLTR (Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamydia trachomatis GN=gap PE=3 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 3.857e-13 Identity = 41/116 (35.34%), Postives = 57/116 (49.14%), Query Frame = 2 Query: 5 LPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 352 LP LKGKL G+A RVP + S T E + A + +A+ +K I+ +E +VS DF + D K++AWYDNE GY+ R+VDL + V N K Sbjct: 219 LPELKGKLTGMAFRVPVADVSVVDLTVKLSSATTYEAICEAVKHAANTSMKNIMYYTEEAVVSSDFIGCEYSSVFDAQAGVALNDRFFKLVAWYDNEIGYATRIVDLLEYVQENSK 334
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P1_AGABI (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Agaricus bisporus GN=gpd1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 5.038e-13 Identity = 41/116 (35.34%), Postives = 60/116 (51.72%), Query Frame = 2 Query: 5 LPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNE----LKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 340 +P L+GKL G+A RVPT + K+T ++V A R++AD + KGI+ +E +VS DF + +K++AWYDNEWGY++RV D VA Sbjct: 219 IPDLEGKLTGLAFRVPTLDVSVVDLVVRLEKETSYDDVKKAMRDAADGKHPGIEKGIVDYTEEDVVSTDFVGSNYSMIFDAKAGIALNSRFMKLVAWYDNEWGYARRVCDEVVYVA 334
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_CHLMU (Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamydia muridarum GN=gap PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.579e-13 Identity = 41/116 (35.34%), Postives = 56/116 (48.28%), Query Frame = 2 Query: 5 LPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 352 LP LKGKL G+A RVP + S T E V A + +A ++ I+ +E +VS DF + D K+IAWYDNE GY+ R+VDL + + N K Sbjct: 220 LPELKGKLTGMAFRVPVADVSVVDLTVKLSSATTYEAVCEAVKHAASTSMRNIMHYTEEAVVSSDFIGCEYSSVFDAQAGVALNDRFFKLIAWYDNEIGYATRIVDLLEYIQGNSK 335
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: E4PD_SHEAM (D-erythrose-4-phosphate dehydrogenase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=epd PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.579e-13 Identity = 38/109 (34.86%), Postives = 52/109 (47.71%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 328 +LP +K K I++RVPT N + VNAA + +AD GIL DEPLVS DF +VK++ W DNEWG++ R++D A Sbjct: 221 ILPQMKDKFEAISVRVPTINVTAIDLSVTLDTRVDIATVNAALKAAADGSASGILGYTDEPLVSCDFNHDPRSSVVDGTQTRVSAGHLVKMLLWCDNEWGFANRMLDTA 329
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: E4PD_AERS4 (D-erythrose-4-phosphate dehydrogenase OS=Aeromonas salmonicida (strain A449) GN=epd PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.579e-13 Identity = 38/107 (35.51%), Postives = 53/107 (49.53%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 322 +LP GK IA+RVPT N KK +VN A + ++ L GIL +EPLVSVDF ++VK++ W DNEWG++ R++D Sbjct: 221 ILPHFAGKFEAIAVRVPTINVTAMDLSITVRKKVTVTDVNQALQRASRGTLSGILDYTEEPLVSVDFNHDAHSCIIDGTQTRVSDANLVKMLMWCDNEWGFANRMLD 327
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: E4PD_AERHH (D-erythrose-4-phosphate dehydrogenase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=epd PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.579e-13 Identity = 38/107 (35.51%), Postives = 53/107 (49.53%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 322 +LP GK IA+RVPT N KK +VN A + ++ L GIL +EPLVSVDF ++VK++ W DNEWG++ R++D Sbjct: 221 ILPHFAGKFEAIAVRVPTINVTAMDLSITVRKKVTVTDVNQALQRASRGTLSGILDYTEEPLVSVDFNHDAHSCIIDGTQTRVSDANLVKMLMWCDNEWGFANRMLD 327
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_PSEAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Pseudomonas aeruginosa GN=gap PE=3 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 8.593e-13 Identity = 42/109 (38.53%), Postives = 57/109 (52.29%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 328 VLP L GKL G+A+RVP N ++ T +EVN RE+++ +L +PLVSVDF G +VK +AWYDNEWG+S R++D A Sbjct: 221 VLPELAGKLTGLAVRVPVINVSLVDLTVQVARDTSVDEVNRLLREASEGS--PVLGYNTQPLVSVDFNHDPRSSIFDANHTKVSGR-LVKAMAWYDNEWGFSNRMLDSA 326
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: E4PD_SHEFN (D-erythrose-4-phosphate dehydrogenase OS=Shewanella frigidimarina (strain NCIMB 400) GN=epd PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.593e-13 Identity = 35/107 (32.71%), Postives = 53/107 (49.53%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 322 +LP +K K I++RVPT N KK E++N+ + +++ GIL DEPLVS DF +VK++ W DNEWG++ R++D Sbjct: 221 ILPHMKDKFEAISVRVPTINVTAIDLSVTLEKKVNIEQINSVLQRASNGSFNGILGYTDEPLVSCDFNHDPRSSIVDGTQTRVSAGHLVKLLLWCDNEWGFANRMLD 327
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_BUCBP (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=gapA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.466e-12 Identity = 33/113 (29.20%), Postives = 61/113 (53.98%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 340 VLP L GKL GIA R+PT N K E++ + ++++++K ++ ++ +VS DF + ++ +K+++WYDNE GYS +V+DL++ ++ Sbjct: 218 VLPELNGKLTGIAFRIPTANVSVVDLTVRNKKIATYEDICQIIKYASNHDMKEVIGYTEDHVVSSDFNGNTLTSIFDAKAGLSLNNNFIKLVSWYDNECGYSSKVLDLSEFIS 330 The following BLAST results are available for this feature:
BLAST of CX300193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300193 ID=CX300193; Name=CX300193; organism=Citrus clementina; type=EST; length=430bpback to top |