CX300193
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_MYCBO (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium bovis GN=gap PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.617e-19 Identity = 49/115 (42.61%), Postives = 64/115 (55.65%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 346 V+P LKGKL+G ALRVP P S + +E+NAAF+ +A+ LKGIL D P+VS D + DD KV++WYDNEWGYS R+VDL +V + Sbjct: 225 VMPQLKGKLDGYALRVPIPTGSVTDLTVDLSTRASVDEINAAFKAAAEGRLKGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVI-DDQAKVVSWYDNEWGYSNRLVDLVTLVGKS 338
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_THEMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Thermotoga maritima GN=gap PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 2.112e-19 Identity = 47/112 (41.96%), Postives = 66/112 (58.93%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIV 337 V+P +KGKL+G+A+RVPTP+ K+T EEVNA +E+ + LKGI+ DEP+VS D +G +VKV +WYDNE+GYS RVVD +++ Sbjct: 219 VVPEVKGKLDGMAIRVPTPDGSITDLTVLVEKETTVEEVNAVMKEATEGRLKGIIGYNDEPIVSSDIIGTTFSGIFDATITNVIGGKLVKVASWYDNEYGYSNRVVDTLELL 330
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P2_STAEQ (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gapA2 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.602e-19 Identity = 50/110 (45.45%), Postives = 64/110 (58.18%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLAD 331 VLP ++GKL+G+ALRVPT N + +VN AF+ + +L G+L V + PLVSVDF MG + VKVIAWYDNEWGYS RVV++AD Sbjct: 220 VLPEVEGKLHGMALRVPTKNVSLVDLVVDLEQNVTVTQVNDAFKNA---DLSGVLDVEEAPLVSVDFNTNPHSAIIDSQSTMVMGQNKVKVIAWYDNEWGYSNRVVEVAD 326
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3PC_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Hordeum vulgare GN=GAPC PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.704e-19 Identity = 47/108 (43.52%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 325 VLP L GKL G+A RVPT + +K E++ AA +E ++ LKGIL DE LVS DF+ + D+ VK+++WYDNEWGYS RVVDL Sbjct: 190 VLPELNGKLTGMAFRVPTVDVSVVDLTVRLAKPATYEQIKAAIKEESEGNLKGILGYVDEDLVSTDFQGDSRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSTRVVDL 297
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3PC_GINBI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ginkgo biloba PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.704e-19 Identity = 45/108 (41.67%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 325 VLPAL GKL G+A RVPTP+ K +E+ AA +E ++ +LKGIL ++ +VS DF + D+ VK+++WYDNEWGYS RV+DL Sbjct: 225 VLPALNGKLTGMAFRVPTPDVSVVDLTVRLEKPASYDEIKAAIKEESEGKLKGILGYTEDDVVSTDFIGDNRSSIFDAKAGIALSDNFVKLVSWYDNEWGYSSRVIDL 332
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P1_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap1 PE=3 SV=4) HSP 1 Score: 93.2041 bits (230), Expect = 4.704e-19 Identity = 47/108 (43.52%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 325 VLP LKGKL G+A RVPTP+ +K T +E+ AA +++++ L GIL DE +VS DF+ + + KV+AWYDNEWGYS RVVDL Sbjct: 223 VLPELKGKLTGMAFRVPTPDVSVVDLTFKTAKATSYKEICAAMKQASEGSLAGILGYTDEEVVSTDFQGDTHSSIFDAGAGIELNSNFFKVVAWYDNEWGYSNRVVDL 330
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P1_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena sp. (strain PCC 7120) GN=gap1 PE=1 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 4.704e-19 Identity = 47/108 (43.52%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 325 VLP LKGKL G+A RVPTP+ +K T +E+ AA +++++ L GIL DE +VS DF+ + + KV+AWYDNEWGYS RVVDL Sbjct: 223 VLPELKGKLTGMAFRVPTPDVSVVDLTFKTAKATSYKEICAAMKQASEGSLAGILGYTDEEVVSTDFQGDTHSSIFDAGAGIELNSNFFKVVAWYDNEWGYSNRVVDL 330
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3PC_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Chlamydomonas reinhardtii GN=GAPC PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 6.144e-19 Identity = 49/113 (43.36%), Postives = 64/113 (56.64%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 340 VLP LKGKL G+A RVPT + K T E++ A +E+++ E+KG+L+ DE +VS DF + VK++AWYDNEWGYS RVVDLA VA Sbjct: 222 VLPELKGKLTGMAFRVPTNDVSVVDLTVTLEKATTYEDIMKALKEASEGEMKGVLAYTDEDVVSSDFVTDPASCTVDAKAGIMLSPTFVKLVAWYDNEWGYSNRVVDLALHVA 334
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_MYCAV (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium avium GN=gapA PE=3 SV=3) HSP 1 Score: 91.6633 bits (226), Expect = 1.369e-18 Identity = 48/115 (41.74%), Postives = 63/115 (54.78%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 346 V+P LKGKL+G ALRVP P K E++NAAF+ +A+ LKGIL D P+VS D + D+ KV++WYDNEWGYS R+VDL +V + Sbjct: 225 VMPNLKGKLDGYALRVPIPTGSVTDLTAELKKPASVEDINAAFKAAAEGRLKGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVI-DNQAKVVSWYDNEWGYSNRLVDLVALVGKS 338
BLAST of CX300193 vs. ExPASy Swiss-Prot
Match: G3P_BACFR (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacteroides fragilis GN=gap PE=3 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 1.369e-18 Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = 2 Query: 2 VLPALKGKLNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 340 VLP L GKL G+A RVPT + K E+NAA +E+++ ELKGIL ++ +VS DFR + + KV++WYDNEWGYS +V ++A ++A Sbjct: 219 VLPVLNGKLTGMAFRVPTSDVSVVDLTVVLEKAATMAEINAAMKEASEGELKGILGYTEDAVVSTDFRGCANTSIYDSKAGISLDSNFAKVVSWYDNEWGYSNKVCEMARVIA 331 The following BLAST results are available for this feature:
BLAST of CX300193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300193 ID=CX300193; Name=CX300193; organism=Citrus clementina; type=EST; length=430bpback to top |