CX300195
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_BOTFU (Tubulin beta chain OS=Botryotinia fuckeliana GN=tubA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.373e-24 Identity = 51/57 (89.47%), Postives = 56/57 (98.25%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M+STF+GNSTSIQE+F+RV +QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 363 MSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB4_OOMCK (Tubulin beta-4 chain OS=Oomycete-like sp. (strain MacKay2000) GN=TUBB4 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.373e-24 Identity = 51/57 (89.47%), Postives = 56/57 (98.25%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M++TF+GNST+IQEMF+RV EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 363 MSATFVGNSTAIQEMFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB2_TRIVI (Tubulin beta-2 chain OS=Trichoderma viride GN=tub2 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.373e-24 Identity = 52/57 (91.23%), Postives = 56/57 (98.25%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M+STFIGNSTSIQE+F+RV EQF+AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 363 MSSTFIGNSTSIQELFKRVGEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB2_TRIVE (Tubulin beta-2 chain OS=Trichoderma virens PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.373e-24 Identity = 52/57 (91.23%), Postives = 56/57 (98.25%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M+STFIGNSTSIQE+F+RV EQF+AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 363 MSSTFIGNSTSIQELFKRVGEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB2_ERYPI (Tubulin beta-2 chain OS=Erysiphe pisi GN=TUB2 PE=2 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 1.373e-24 Identity = 51/57 (89.47%), Postives = 56/57 (98.25%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M+STF+GNSTSIQE+F+RV +QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 363 MSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_STYLE (Tubulin beta chain OS=Stylonychia lemnae GN=TUBB1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.794e-24 Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 MA TF+GNST+IQEMF+RV EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 363 MAVTFLGNSTAIQEMFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_PESMI (Tubulin beta chain OS=Pestalotiopsis microspora GN=TUBB PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.794e-24 Identity = 50/57 (87.72%), Postives = 56/57 (98.25%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M+STF+GNST+IQE+F+R+ EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 363 MSSTFVGNSTAIQELFKRIGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_NEUCR (Tubulin beta chain OS=Neurospora crassa GN=tub-2 PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 1.794e-24 Identity = 50/57 (87.72%), Postives = 56/57 (98.25%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M+STF+GNST+IQE+F+R+ EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 363 MSSTFVGNSTAIQELFKRIGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB8_PAPHA (Tubulin beta-8 chain OS=Papio hamadryas GN=TUBB8 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.794e-24 Identity = 51/57 (89.47%), Postives = 57/57 (100.00%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M++TFIGN+T+IQE+F+RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 363 MSATFIGNNTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB8_PANTR (Tubulin beta-8 chain OS=Pan troglodytes GN=TUBB8 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.794e-24 Identity = 51/57 (89.47%), Postives = 57/57 (100.00%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M++TFIGN+T+IQE+F+RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 363 MSATFIGNNTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419 The following BLAST results are available for this feature:
BLAST of CX300195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300195 ID=CX300195; Name=CX300195; organism=Citrus clementina; type=EST; length=445bpback to top |