CX300195
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB3_OOMCK (Tubulin beta-3 chain OS=Oomycete-like sp. (strain MacKay2000) GN=TUBB3 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 6.816e-24 Identity = 49/57 (85.96%), Postives = 56/57 (98.25%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M+STF+GNST+IQEMF+RV EQFTAM++RKAFLHWYTGEGMD+MEFTEAESNMNDLV Sbjct: 363 MSSTFVGNSTAIQEMFKRVGEQFTAMYKRKAFLHWYTGEGMDDMEFTEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB2_OOMCK (Tubulin beta-2 chain (Fragment) OS=Oomycete-like sp. (strain MacKay2000) GN=TUBB2 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 6.816e-24 Identity = 50/57 (87.72%), Postives = 55/57 (96.49%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M++ FIGNST+IQEMF+R+ EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 338 MSACFIGNSTAIQEMFKRIGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 394
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB2_COLGR (Tubulin beta-2 chain OS=Colletotrichum graminicola GN=TUB2 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 6.816e-24 Identity = 50/57 (87.72%), Postives = 55/57 (96.49%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M+ TF+GNST+IQE+F+RV EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 363 MSFTFVGNSTAIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_SCHPO (Tubulin beta chain OS=Schizosaccharomyces pombe GN=nda3 PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 8.902e-24 Identity = 50/57 (87.72%), Postives = 56/57 (98.25%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M++TFIGNSTSIQE+FRR+ +QF+AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 363 MSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB6_BOVIN (Tubulin beta-6 chain OS=Bos taurus GN=TUBB6 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 8.902e-24 Identity = 49/57 (85.96%), Postives = 57/57 (100.00%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M++TFIGNST+IQE+F+R+SEQF+AMFRRKAFLHW+TGEGMDEMEFTEAESNMNDLV Sbjct: 363 MSATFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB1_TRIVE (Tubulin beta-1 chain OS=Trichoderma virens PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.163e-23 Identity = 50/57 (87.72%), Postives = 55/57 (96.49%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 ++STF+GNST+IQE+FRRV EQFTAMFRRKAFLHWYT EGMDEMEFTEAESNMNDLV Sbjct: 363 ISSTFVGNSTAIQEIFRRVGEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB1_SOYBN (Tubulin beta-1 chain OS=Glycine max GN=TUBB1 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.163e-23 Identity = 50/57 (87.72%), Postives = 54/57 (94.74%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M+STF+GNSTSIQEMFRRVSEQFT MF+RKAFLHWYTGEGMDEMEFTE +NMNDLV Sbjct: 363 MSSTFMGNSTSIQEMFRRVSEQFTVMFKRKAFLHWYTGEGMDEMEFTEVRANMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_ASPFU (Tubulin beta chain OS=Aspergillus fumigatus GN=AFUA_7G00250 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.983e-23 Identity = 48/57 (84.21%), Postives = 56/57 (98.25%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M++TF+GNSTS+QE+F+RV+ QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL+ Sbjct: 363 MSATFVGNSTSVQELFQRVATQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLM 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_AJECA (Tubulin beta chain OS=Ajellomyces capsulata GN=TUB2 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.590e-23 Identity = 49/57 (85.96%), Postives = 55/57 (96.49%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M+STF+ NST+IQE+F+RV +QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 364 MSSTFVENSTAIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 420
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB6_ECTVR (Tubulin beta-6 chain OS=Ectocarpus variabilis GN=TUBB6 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.590e-23 Identity = 48/57 (84.21%), Postives = 57/57 (100.00%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M++TF+GN+T+IQE+++RV+EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 363 MSTTFVGNTTAIQEVWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419 The following BLAST results are available for this feature:
BLAST of CX300195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300195 ID=CX300195; Name=CX300195; organism=Citrus clementina; type=EST; length=445bpback to top |