CX300195
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_CANAL (Tubulin beta chain OS=Candida albicans GN=TUB2 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 3.383e-23 Identity = 49/57 (85.96%), Postives = 55/57 (96.49%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M++TFIGNSTSIQE+F+RV +QF+AMFRRKAFLHWYT EGMDEMEFTEAESNMNDLV Sbjct: 363 MSATFIGNSTSIQELFKRVGDQFSAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB1_ECHMU (Tubulin beta-1 chain OS=Echinococcus multilocularis GN=TUB-1 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 3.383e-23 Identity = 49/57 (85.96%), Postives = 55/57 (96.49%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M+ TF+GN+T+IQE+F+RVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 363 MSVTFMGNTTAIQEIFKRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_LEIME (Tubulin beta chain OS=Leishmania mexicana PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 4.418e-23 Identity = 50/57 (87.72%), Postives = 52/57 (91.23%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M+ TFIGN+T IQEMFRRV EQFT MFRRK FLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 365 MSVTFIGNNTCIQEMFRRVGEQFTGMFRRKRFLHWYTGEGMDEMEFTEAESNMNDLV 421
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_ENCIN (Tubulin beta chain OS=Encephalitozoon intestinalis GN=TUB2 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.770e-23 Identity = 46/57 (80.70%), Postives = 56/57 (98.25%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M++TF+GN+TSIQE+F+R+S+QFT MFRRKAFLHWYTGEGMDEMEF+EAESNMNDL+ Sbjct: 363 MSATFVGNTTSIQELFKRISDQFTVMFRRKAFLHWYTGEGMDEMEFSEAESNMNDLL 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_ENCHE (Tubulin beta chain OS=Encephalitozoon hellem GN=TUB2 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.770e-23 Identity = 46/57 (80.70%), Postives = 56/57 (98.25%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M++TF+GN+TSIQE+F+R+S+QFT MFRRKAFLHWYTGEGMDEMEF+EAESNMNDL+ Sbjct: 363 MSATFVGNTTSIQELFKRISDQFTVMFRRKAFLHWYTGEGMDEMEFSEAESNMNDLL 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_ENCCU (Tubulin beta chain OS=Encephalitozoon cuniculi GN=TUB2 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.770e-23 Identity = 46/57 (80.70%), Postives = 56/57 (98.25%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M++TF+GN+TSIQE+F+R+S+QFT MFRRKAFLHWYTGEGMDEMEF+EAESNMNDL+ Sbjct: 363 MSATFVGNTTSIQELFKRISDQFTVMFRRKAFLHWYTGEGMDEMEFSEAESNMNDLL 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB5_ECTVR (Tubulin beta-5 chain OS=Ectocarpus variabilis GN=TUBB5 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.770e-23 Identity = 47/57 (82.46%), Postives = 57/57 (100.00%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M++TF+GN+T+IQE+++RV+EQFT+MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 363 MSTTFVGNTTAIQEVWKRVAEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_TRIRU (Tubulin beta chain OS=Trichophyton rubrum PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 7.536e-23 Identity = 48/57 (84.21%), Postives = 55/57 (96.49%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M+STF+GNSTSIQE+F+RV +QFTAMFR+KAFL WYTGEGMDEMEFTEAE+NMNDLV Sbjct: 363 MSSTFVGNSTSIQELFKRVGDQFTAMFRKKAFLFWYTGEGMDEMEFTEAENNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_THAWE (Tubulin beta chain OS=Thalassiosira weissflogii PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 7.536e-23 Identity = 47/57 (82.46%), Postives = 55/57 (96.49%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 MA+TF+GN+T++QE ++RV+EQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 363 MATTFVGNTTAVQETWKRVAEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_UROFA (Tubulin beta chain OS=Uromyces fabae GN=TBB1 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 9.843e-23 Identity = 48/57 (84.21%), Postives = 55/57 (96.49%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M+ TFIGNST+IQ++F+RV++QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM DLV Sbjct: 363 MSVTFIGNSTAIQDLFKRVADQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMQDLV 419 The following BLAST results are available for this feature:
BLAST of CX300195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300195 ID=CX300195; Name=CX300195; organism=Citrus clementina; type=EST; length=445bpback to top |