CX300195
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBBN_GUITH (Tubulin beta chain, nucleomorph OS=Guillardia theta GN=tubB PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 9.843e-23 Identity = 49/57 (85.96%), Postives = 53/57 (92.98%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M++ FIGNSTSIQE+F+RV EQF AMFRRKAFLHWYTGEGMDEMEFTEAESNM DLV Sbjct: 363 MSAAFIGNSTSIQELFKRVGEQFQAMFRRKAFLHWYTGEGMDEMEFTEAESNMQDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB1_TRIVI (Tubulin beta-1 chain OS=Trichoderma viride GN=tub1 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 9.843e-23 Identity = 48/57 (84.21%), Postives = 55/57 (96.49%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 ++STF+GNST+IQE+FRRV EQF+AMFRR+AFLHWYT EGMDEMEFTEAESNMNDLV Sbjct: 365 ISSTFVGNSTAIQEIFRRVGEQFSAMFRRQAFLHWYTSEGMDEMEFTEAESNMNDLV 421
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB1_COLGL (Tubulin beta-1 chain OS=Colletotrichum gloeosporioides GN=TUB1 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 9.843e-23 Identity = 48/56 (85.71%), Postives = 54/56 (96.43%), Query Frame = 3 Query: 6 ASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 +STFIGNST+IQ++FRRV +QF+ MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 365 SSTFIGNSTAIQDIFRRVGDQFSVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 420
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_MELLI (Tubulin beta chain OS=Melampsora lini GN=TUB1 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.285e-22 Identity = 47/57 (82.46%), Postives = 55/57 (96.49%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M+ TFIGNST+IQ++F+R+++QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM DLV Sbjct: 363 MSVTFIGNSTAIQDLFKRIADQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMQDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB8B_HUMAN (Tubulin beta-8 chain B OS=Homo sapiens PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.285e-22 Identity = 49/57 (85.96%), Postives = 54/57 (94.74%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M++TFIGN+ +IQE+F VSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 363 MSATFIGNNAAIQELFTCVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_HALDI (Tubulin beta chain (Fragment) OS=Haliotis discus PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.193e-22 Identity = 47/53 (88.68%), Postives = 53/53 (100.00%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 161 M++TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM Sbjct: 289 MSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 341
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_COPC7 (Tubulin beta chain OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_04743 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.864e-22 Identity = 48/57 (84.21%), Postives = 54/57 (94.74%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 MA TF+GNST+IQE+F+RVS+QFTAMF+RKAFLHWYT EGMDEMEFTEAESNM DLV Sbjct: 363 MAVTFLGNSTAIQELFKRVSDQFTAMFKRKAFLHWYTQEGMDEMEFTEAESNMQDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB2_PHYPO (Tubulin beta-2 chain OS=Physarum polycephalum GN=BETC PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.864e-22 Identity = 47/57 (82.46%), Postives = 54/57 (94.74%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M++TFIGN+T IQE+F+R+ QF+AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 363 MSATFIGNNTCIQELFKRIGLQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB1_COLGR (Tubulin beta-1 chain OS=Colletotrichum graminicola GN=TUB1 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.864e-22 Identity = 48/57 (84.21%), Postives = 53/57 (92.98%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 ++STFIGNST+IQ FRRV +QF+ MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 361 VSSTFIGNSTAIQNSFRRVGDQFSLMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 417
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: YI016_HUMAN (Putative tubulin beta chain-like protein ENSP00000290377 OS=Homo sapiens PE=5 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 3.740e-22 Identity = 48/57 (84.21%), Postives = 54/57 (94.74%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M+++FIGN+ +IQE+F VSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 291 MSASFIGNNAAIQELFTCVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 347 The following BLAST results are available for this feature:
BLAST of CX300195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300195 ID=CX300195; Name=CX300195; organism=Citrus clementina; type=EST; length=445bpback to top |