CX300195
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB6_CHICK (Tubulin beta-6 chain OS=Gallus gallus PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.740e-22 Identity = 48/57 (84.21%), Postives = 54/57 (94.74%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 MA+TFIGN+T+IQE+F RVSEQF+AMFRRKAFLHWYTGEGMDEMEF+EAE N NDLV Sbjct: 363 MAATFIGNNTAIQELFIRVSEQFSAMFRRKAFLHWYTGEGMDEMEFSEAEGNTNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_SCHCO (Tubulin beta chain OS=Schizophyllum commune GN=TUB-2 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 6.380e-22 Identity = 47/57 (82.46%), Postives = 54/57 (94.74%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M+ TF+GNST+IQE+F+RVS+QFTAMF+RKAFLHWYT EGMDEMEFTEAESNM DLV Sbjct: 363 MSVTFLGNSTAIQELFKRVSDQFTAMFKRKAFLHWYTQEGMDEMEFTEAESNMQDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_YEAST (Tubulin beta chain OS=Saccharomyces cerevisiae GN=TUB2 PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 1.088e-21 Identity = 46/57 (80.70%), Postives = 54/57 (94.74%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 MA+TFI NSTSIQE+F+RV +QF+AMF+RKAFLHWYT EGMDE+EF+EAESNMNDLV Sbjct: 363 MAATFIANSTSIQELFKRVGDQFSAMFKRKAFLHWYTSEGMDELEFSEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_USTMA (Tubulin beta chain OS=Ustilago maydis GN=UM05828 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.421e-21 Identity = 44/57 (77.19%), Postives = 55/57 (96.49%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M+ TFIGNST+IQ++F+R++EQF+AMF+RKAFLHWYTGEGMDEMEFTEAESN+ DL+ Sbjct: 363 MSVTFIGNSTAIQDVFKRIAEQFSAMFKRKAFLHWYTGEGMDEMEFTEAESNLQDLI 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB1_SUIBO (Tubulin beta-1 chain OS=Suillus bovinus GN=TUBB1 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.421e-21 Identity = 46/57 (80.70%), Postives = 53/57 (92.98%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 MA TF+GNST+IQE+F+RVS+ FTAMF+RKAFLHWYT EGMDEMEFTEAESNM DL+ Sbjct: 363 MAVTFLGNSTAIQELFKRVSDHFTAMFKRKAFLHWYTQEGMDEMEFTEAESNMQDLI 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_PORYE (Tubulin beta chain OS=Porphyra yezoensis GN=TUBB1 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.424e-21 Identity = 45/57 (78.95%), Postives = 53/57 (92.98%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M++ FIGNST+IQ++F+RV F+AMF+RKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 363 MSAAFIGNSTAIQDIFKRVGSHFSAMFKRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_PORPU (Tubulin beta chain OS=Porphyra purpurea GN=TUBB1 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.424e-21 Identity = 45/57 (78.95%), Postives = 53/57 (92.98%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M++ FIGNST+IQ++F+RV F+AMF+RKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 363 MSAAFIGNSTAIQDIFKRVGSHFSAMFKRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB_PLESA (Tubulin beta chain OS=Pleurotus sajor-caju PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.424e-21 Identity = 46/57 (80.70%), Postives = 53/57 (92.98%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 MA TF+GNST+IQE+F+RV++QF AMF+RKAFLHWYT EGMDEMEFTEAESNM DLV Sbjct: 363 MAVTFLGNSTAIQELFKRVNDQFAAMFKRKAFLHWYTQEGMDEMEFTEAESNMQDLV 419
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB3_ANEPH (Tubulin beta-3 chain (Fragment) OS=Anemia phyllitidis GN=TUBB3 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 7.054e-21 Identity = 48/57 (84.21%), Postives = 50/57 (87.72%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 MA TFIGNS+SIQEMFRR + TAMFRRKAFLHWYT EGMDEMEFTE ESNMNDLV Sbjct: 159 MACTFIGNSSSIQEMFRRDATSLTAMFRRKAFLHWYTWEGMDEMEFTEEESNMNDLV 215
BLAST of CX300195 vs. ExPASy Swiss-Prot
Match: TBB4Q_HUMAN (Putative tubulin beta-4q chain OS=Homo sapiens GN=TUBB4Q PE=5 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.203e-20 Identity = 47/57 (82.46%), Postives = 53/57 (92.98%), Query Frame = 3 Query: 3 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 173 M+ TF GN+T++QE+ +RVSEQFTA FRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 363 MSVTFTGNNTAVQEL-KRVSEQFTATFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 418 The following BLAST results are available for this feature:
BLAST of CX300195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300195 ID=CX300195; Name=CX300195; organism=Citrus clementina; type=EST; length=445bpback to top |