CX300207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADB_BACSU (Probable enoyl-CoA hydratase OS=Bacillus subtilis GN=fadB PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 4.337e-21 Identity = 57/145 (39.31%), Postives = 81/145 (55.86%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNY-CVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEEECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 A+AC +RI E A LGLPE L IIPG GTQRLPR VG + A ++I +G +SGK+A+ LGLV+ + KA +A + +K P + + +L+LE + + +ED EG+ AF EKRKP++ G Sbjct: 113 AMACHIRIAAEDAKLGLPELNLGIIPGFAGTQRLPRYVGTAKALELIGSGEPISGKEALDLGLVSIGAKDEAEVIEKAKALAAKFAEKSPQTLASLLELLYSNKVYSYEGSLKLEAKRFGEAFESEDAKEGIQAFLEKRKPQFKG 257
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CRT_CLODI (3-hydroxybutyryl-CoA dehydratase (Fragment) OS=Clostridium difficile GN=crt PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.671e-20 Identity = 51/134 (38.06%), Postives = 79/134 (58.96%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEEECYIGTLHTEDRLEGLAAF 403 A+ACD+RI A G PE L I PG GGTQRL RLVG + AK++IFTG+ + +A +GLVN V + ++A+ I + +A+R +K AI G + D+ + +++E + T+D+ EG+ +F Sbjct: 21 AMACDIRIASAKAKFGQPEVTLGITPGYGGTQRLTRLVGMAKAKELIFTGQVIKADEAEKIGLVNRVVEPDILIEEVEKLAKIIAKNAQLAVRYSKEAIQLGAQTDINTGIDIESNLFGLCFSTKDQKEGIVSF 154
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_SALTI (Carnitinyl-CoA dehydratase OS=Salmonella typhi GN=caiD PE=3 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 4.795e-20 Identity = 53/148 (35.81%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D +C E A LPE L I+P +GG RLP+L+ ++ +++ TGR++S ++A+ G+VN V + A E+AQ++ P+AI K E+ + + Y LH+ED LEG AFAEKR P + G Sbjct: 113 ALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQSELMESARELAQQLVNSAPLAIAALKEIYRATSEMPVEEGYRYIRSGVLKHYPSVLHSEDALEGPQAFAEKRAPVWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_SALTY (Carnitinyl-CoA dehydratase OS=Salmonella typhimurium GN=caiD PE=3 SV=3) HSP 1 Score: 96.2857 bits (238), Expect = 6.263e-20 Identity = 53/148 (35.81%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D +C E A LPE L I+P +GG RLP+L+ ++ +++ TGR++S ++A+ G+VN V + A E+AQ++ P+AI K E+ + + Y LH+ED LEG AFAEKR P + G Sbjct: 113 ALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQSELMESARELAQQLVNSAPLAIAALKEIYRATSEMPVEEGYRYIRSGVLKHYPSVLHSEDALEGPQAFAEKRDPVWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_SALSV (Carnitinyl-CoA dehydratase OS=Salmonella schwarzengrund (strain CVM19633) GN=caiD PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.263e-20 Identity = 53/148 (35.81%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D +C E A LPE L I+P +GG RLP+L+ ++ +++ TGR++S ++A+ G+VN V + A E+AQ++ P+AI K E+ + + Y LH+ED LEG AFAEKR P + G Sbjct: 113 ALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQSELMESARELAQQLVNSAPLAIAALKEIYRATSEMPVEEGYRYIRSGVLKHYPSVLHSEDALEGPQAFAEKRDPVWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_SALPK (Carnitinyl-CoA dehydratase OS=Salmonella paratyphi A (strain AKU_12601) GN=caiD PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.263e-20 Identity = 53/148 (35.81%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D +C E A LPE L I+P +GG RLP+L+ ++ +++ TGR++S ++A+ G+VN V + A E+AQ++ P+AI K E+ + + Y LH+ED LEG AFAEKR P + G Sbjct: 113 ALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQSELMDSARELAQQLVNSAPLAIAALKEIYRATSEMPVEEGYRYIRSGVLKHYPSVLHSEDALEGPQAFAEKRDPVWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_SALPC (Carnitinyl-CoA dehydratase OS=Salmonella paratyphi C (strain RKS4594) GN=caiD PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.263e-20 Identity = 53/148 (35.81%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D +C E A LPE L I+P +GG RLP+L+ ++ +++ TGR++S ++A+ G+VN V + A E+AQ++ P+AI K E+ + + Y LH+ED LEG AFAEKR P + G Sbjct: 113 ALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQSELMDSARELAQQLVNSAPLAIAALKEIYRATSEMPVEEGYRYIRSGVLKHYPSVLHSEDALEGPQAFAEKRDPVWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_SALPA (Carnitinyl-CoA dehydratase OS=Salmonella paratyphi A GN=caiD PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.263e-20 Identity = 53/148 (35.81%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D +C E A LPE L I+P +GG RLP+L+ ++ +++ TGR++S ++A+ G+VN V + A E+AQ++ P+AI K E+ + + Y LH+ED LEG AFAEKR P + G Sbjct: 113 ALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQSELMDSARELAQQLVNSAPLAIAALKEIYRATSEMPVEEGYRYIRSGVLKHYPSVLHSEDALEGPQAFAEKRDPVWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_SALNS (Carnitinyl-CoA dehydratase OS=Salmonella newport (strain SL254) GN=caiD PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.263e-20 Identity = 53/148 (35.81%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D +C E A LPE L I+P +GG RLP+L+ ++ +++ TGR++S ++A+ G+VN V + A E+AQ++ P+AI K E+ + + Y LH+ED LEG AFAEKR P + G Sbjct: 113 ALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQSELMESARELAQQLVNSAPLAIAALKEIYRATSEMPVEEGYRYIRSGVLKHYPSVLHSEDALEGPQAFAEKRAPVWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_SALHS (Carnitinyl-CoA dehydratase OS=Salmonella heidelberg (strain SL476) GN=caiD PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.263e-20 Identity = 53/148 (35.81%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D +C E A LPE L I+P +GG RLP+L+ ++ +++ TGR++S ++A+ G+VN V + A E+AQ++ P+AI K E+ + + Y LH+ED LEG AFAEKR P + G Sbjct: 113 ALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQSELMESARELAQQLVNSAPLAIAALKEIYRATSEMPVEEGYRYIRSGVLKHYPSVLHSEDALEGPQAFAEKRDPVWKG 260 The following BLAST results are available for this feature:
BLAST of CX300207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300207 ID=CX300207; Name=CX300207; organism=Citrus clementina; type=EST; length=448bpback to top |