CX300207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_ECOLI (Carnitinyl-CoA dehydratase OS=Escherichia coli (strain K12) GN=caiD PE=1 SV=4) HSP 1 Score: 93.5893 bits (231), Expect = 4.059e-19 Identity = 50/148 (33.78%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D +C + A LPE L I+P +GG RLP+++ ++ +++ TGR++ ++A+ G+VN V + A E+AQ++ P+AI K E+ + A + Y LH+ED +EG AFAEKR P + G Sbjct: 113 ALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_ECOLC (Carnitinyl-CoA dehydratase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=caiD PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 4.059e-19 Identity = 50/148 (33.78%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D +C + A LPE L I+P +GG RLP+++ ++ +++ TGR++ ++A+ G+VN V + A E+AQ++ P+AI K E+ + A + Y LH+ED +EG AFAEKR P + G Sbjct: 113 ALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_ECOSM (Carnitinyl-CoA dehydratase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=caiD PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 5.302e-19 Identity = 50/148 (33.78%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D +C + A LPE L I+P +GG RLP+++ ++ +++ TGR++ ++A+ G+VN V + A E+AQ++ P+AI K E+ + A + Y LH+ED +EG AFAEKR P + G Sbjct: 113 ALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGVVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKNYPSVLHSEDAIEGPLAFAEKRDPVWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_ECOL6 (Carnitinyl-CoA dehydratase OS=Escherichia coli O6 GN=caiD PE=3 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 5.302e-19 Identity = 50/148 (33.78%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D +C + A LPE L I+P +GG RLP+++ ++ +++ TGR++ ++A+ G+VN V + A E+AQ++ P+AI K E+ + A + Y LH+ED +EG AFAEKR P + G Sbjct: 113 ALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGVVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_ECOL5 (Carnitinyl-CoA dehydratase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=caiD PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 5.302e-19 Identity = 50/148 (33.78%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D +C + A LPE L I+P +GG RLP+++ ++ +++ TGR++ ++A+ G+VN V + A E+AQ++ P+AI K E+ + A + Y LH+ED +EG AFAEKR P + G Sbjct: 113 ALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGVVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_ECO57 (Carnitinyl-CoA dehydratase OS=Escherichia coli O157:H7 GN=caiD PE=3 SV=3) HSP 1 Score: 92.4337 bits (228), Expect = 9.043e-19 Identity = 49/148 (33.11%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D +C + A LPE L I+P +GG RLP+++ ++ +++ TGR++ ++A+ G+VN V + A E+AQ++ P+AI K E+ + + + Y LH+ED +EG AFAEKR P + G Sbjct: 113 ALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEESYSYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_CITK8 (Carnitinyl-CoA dehydratase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=caiD PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 3.436e-18 Identity = 52/152 (34.21%), Postives = 80/152 (52.63%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKR--------AITKGLEVDMASALELEEECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D +C + A LPE L I+P +GG RLP+L+ ++ +++ TGR++ ++A+ G+VN V A E+AQ++ P+AI K + +G + AL + Y LH+ED +EG AFAEKR P + G Sbjct: 113 ALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMLMTGRRMDAEEALRWGIVNRVVSQQALMDSARELAQQLVNSAPLAIAALKEIYRATSEMPVEEGYRYIRSGAL----KHYPSVLHSEDAIEGPQAFAEKRDPVWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADJ_VIBVY (Fatty acid oxidation complex subunit alpha OS=Vibrio vulnificus (strain YJ016) GN=fadJ PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 8.464e-17 Identity = 46/102 (45.10%), Postives = 67/102 (65.69%), Query Frame = 2 Query: 2 ALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAIT 301 ALACD R+C + A LGLPE L ++PG+GGTQRLPRL+G + D+I TG+++ K A LG+V+ CVP Q L++A++ +KG + AK+ +T Sbjct: 120 ALACDFRVCSDDDATRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKKLGVVDACVP----QTILLDVAKQFVEKGK---KRAKQKVT 214
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADJ_VIBVU (Fatty acid oxidation complex subunit alpha OS=Vibrio vulnificus GN=fadJ PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.216e-16 Identity = 45/102 (44.12%), Postives = 66/102 (64.71%), Query Frame = 2 Query: 2 ALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAIT 301 ALACD R+C + A LGLPE L ++PG+GGTQRLPRL+G + D+I TG+++ A LG+V+ CVP Q L++A++ +KG + AK+ +T Sbjct: 120 ALACDFRVCSDDDATRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRANKAKKLGVVDACVP----QTILLDVAKQFVEKGK---KRAKQKVT 214
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADJ_SHEFN (Fatty acid oxidation complex subunit alpha OS=Shewanella frigidimarina (strain NCIMB 400) GN=fadJ PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.085e-15 Identity = 41/88 (46.59%), Postives = 59/88 (67.05%), Query Frame = 2 Query: 2 ALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQ 259 ALAC LR+C + +LG+PE L ++PG GGTQRLPRLVG + A D++ TG+++ K A+ +GLVN VP A+E+A++ Q Sbjct: 120 ALACHLRVCSDDKKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDVVPNSILLETAVELAKKGKQ 207 The following BLAST results are available for this feature:
BLAST of CX300207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300207 ID=CX300207; Name=CX300207; organism=Citrus clementina; type=EST; length=448bpback to top |