CX300207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADB_YERPA (Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=fadB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.398e-11 Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 2 Query: 5 LACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCV 205 LA D RI A +GLPET L I+PG GG+ RLPRL+G A +II TG+ V+ DA+ +GLV+ V Sbjct: 122 LATDFRIASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIATGKDVTANDALKIGLVDAVV 188
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADB_YERP3 (Fatty acid oxidation complex subunit alpha OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=fadB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.398e-11 Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 2 Query: 5 LACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCV 205 LA D RI A +GLPET L I+PG GG+ RLPRL+G A +II TG+ V+ DA+ +GLV+ V Sbjct: 122 LATDFRIASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIATGKDVTANDALKIGLVDAVV 188
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: ECH1_RAT (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Rattus norvegicus GN=Ech1 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 1.398e-11 Identity = 39/141 (27.66%), Postives = 73/141 (51.77%), Query Frame = 2 Query: 8 ACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVG-KSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLK-ALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEEECYIGTLHTEDRLEGLAAFAEKRKPK 424 ACD+R C + A + E + + G QRLP+++G +S+ ++ FT RK+ +A+ GLV+ P L A +A +I+ K P+A++ +K + + + +L+ + L T+D ++ + A EK+ K Sbjct: 180 ACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVMLNAAFALAADISSKSPVAVQGSKINLIYSRDHSVDESLDYMATWNMSMLQTQDIIKSVQAAMEKKDSK 320
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: MENB_STAS1 (Naphthoate synthase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=menB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.826e-11 Identity = 40/141 (28.37%), Postives = 71/141 (50.35%), Query Frame = 2 Query: 5 LACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEEECYIGTLHTEDRLEGLAAFAEKRKPKY 427 + CDL I + A+ G + G+ L R+VG A++I + R+ + ++A+ +GLVN VP Q + + ++ QE+ Q P A+R K A+ + +A ++ + + T++ EG AF EKR P + Sbjct: 126 VVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLDQVEDETVQWCQEMKQHSPTALRFLKAAMNADTD-GLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDPDF 265
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: ECHP_PONAB (Peroxisomal bifunctional enzyme OS=Pongo abelii GN=EHHADH PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.115e-11 Identity = 36/99 (36.36%), Postives = 58/99 (58.59%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAI 298 AL C RI A +GLPE L ++PGA GTQ LPRL+G A D+I +GR + +A+ LG+++ V + + +A+ AQ ++ + + R+ + I Sbjct: 106 ALGCHYRIAHSEAQVGLPEVTLGLLPGARGTQLLPRLIGVPAALDLITSGRHILADEALKLGILDKVVNSDPVE-EAIRFAQRVSDQPLESRRLCNKPI 203
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: ECHD3_RAT (Enoyl-CoA hydratase domain-containing protein 3, mitochondrial OS=Rattus norvegicus GN=Echdc3 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.115e-11 Identity = 37/141 (26.24%), Postives = 71/141 (50.35%), Query Frame = 2 Query: 8 ACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEEECYIGTLHTEDRLEGLAAFAEKRKPKYT 430 +CD+ + + + P + + L R V + VA +++FTG +S ++A+ GL++ VP Q + +A IA++I + + K K L D+++A L + + L +D EG+ AF +KR+P ++ Sbjct: 160 SCDIAVASDKSSFATPGVNVGLFCSTPAVA-LGRAVPRKVALEMLFTGEPISAQEALRHGLISKVVPEEQLEEEATRIAKKIASLSRSVVALGKATFYKQLPQDLSTAYFLASQAMVDNLTLKDGQEGIEAFIQKRRPVWS 299
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: ECH1_DICDI (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Dictyostelium discoideum GN=ech1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.115e-11 Identity = 40/139 (28.78%), Postives = 66/139 (47.48%), Query Frame = 2 Query: 8 ACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQL-KALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEEECYIGTLHTEDRLEGLAAFAEKRKP 421 ACD+R+C A + ET L+II G QR+ ++VG A+++ TG+ + K A LVN+ P L + ++A I Q P+ ++ K + + + L L ++D E +F EKR+P Sbjct: 149 ACDIRLCSSDAKFSIRETKLSIIADLGTLQRISKIVGSGFARELALTGKDIDAKTAERFNLVNHVYPDHDTLLSEGRKLALSIAQNSPLVVQATKLTLNHADDHTIDEGLYRVALQNAAFLKSDDLNESATSFFEKRQP 287
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: YHAR_BACSU (Putative enoyl-CoA hydratase/isomerase yhaR OS=Bacillus subtilis GN=yhaR PE=3 SV=4) HSP 1 Score: 67.0106 bits (162), Expect = 4.069e-11 Identity = 41/143 (28.67%), Postives = 76/143 (53.15%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEV-DMASALELEEECYIGTLHTEDRLEGLAAFAEKRKPKY 427 AL D+ + + A+L + G+ ++P GG L + +G++ AK +I++G+K+S +A +GL++ AG A I + + P+ + + I + L++ ++ L LE T+D EG+ AF EKR+PK+ Sbjct: 113 ALCADIVLAEKNAVLAMNFIGIGLVPDGGGHYLLKKRIGEAKAKKLIWSGKKLSASEAADMGLLDGTF-AGDPAEGARPIIETL-LASPLLAMIETKGIFQSLQIEELKKVLSLERSAQERMRRTKDHQEGIRAFLEKREPKF 253
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: MENB_BACSU (Naphthoate synthase OS=Bacillus subtilis GN=menB PE=3 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 4.069e-11 Identity = 39/141 (27.66%), Postives = 71/141 (50.35%), Query Frame = 2 Query: 5 LACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEEECYIGTLHTEDRLEGLAAFAEKRKPKY 427 + CDL I + A+ G + G+ L R+VG A++I + R+ + ++A+ +GLVN VP Q + + ++ +E+ +K P A+R K A + +A + + + T++ EG +F EKRKP + Sbjct: 125 IVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEQLEEETIKWCEEMLEKSPTALRFLKAAFNADTD-GLAGIQQFAGDATLLYYTTDEAKEGRDSFKEKRKPDF 264
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADB_YERE8 (Fatty acid oxidation complex subunit alpha OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fadB PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.069e-11 Identity = 36/82 (43.90%), Postives = 49/82 (59.76%), Query Frame = 2 Query: 5 LACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQE 250 LA D R+ A +GLPET L I+PG GG+ RLPRL+G A +II G+ + KDA+ +GLV+ V + AL I + Sbjct: 122 LATDFRVASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDIIAKDALKVGLVDAVVAPEKLVDAALSILNQ 203 The following BLAST results are available for this feature:
BLAST of CX300207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300207 ID=CX300207; Name=CX300207; organism=Citrus clementina; type=EST; length=448bpback to top |