CX300207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_SALCH (Carnitinyl-CoA dehydratase OS=Salmonella choleraesuis GN=caiD PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.263e-20 Identity = 53/148 (35.81%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D +C E A LPE L I+P +GG RLP+L+ ++ +++ TGR++S ++A+ G+VN V + A E+AQ++ P+AI K E+ + + Y LH+ED LEG AFAEKR P + G Sbjct: 113 ALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQSELMDSARELAQQLVNSAPLAIAALKEIYRATSEMPVEEGYRYIRSGVLKHYPSVLHSEDALEGPQAFAEKRDPVWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_SALA4 (Carnitinyl-CoA dehydratase OS=Salmonella agona (strain SL483) GN=caiD PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.263e-20 Identity = 53/148 (35.81%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D +C E A LPE L I+P +GG RLP+L+ ++ +++ TGR++S ++A+ G+VN V + A E+AQ++ P+AI K E+ + + Y LH+ED LEG AFAEKR P + G Sbjct: 113 ALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQSELMDSARELAQQLVNSAPLAIAALKEIYRATSEMPVEEGYRYIRSGVLKHYPSVLHSEDALEGPQAFAEKRDPVWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_SALPB (Carnitinyl-CoA dehydratase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=caiD PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 8.179e-20 Identity = 53/148 (35.81%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D +C E A LPE L I+P +GG RLP+L+ ++ +++ TGR++S ++A+ G+VN V + A E+AQ++ P+AI K E+ + + Y LH+ED LEG AFAEKR P + G Sbjct: 113 ALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQSELMDSARELAQQLVNSAPLAIAALKEIYRATSEMPVEEGYRYIRSGVLKHYPSVLHSEDALEGPQAFAEKRDPVWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_SALG2 (Carnitinyl-CoA dehydratase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=caiD PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 8.179e-20 Identity = 53/148 (35.81%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D +C E A LPE L I+P +GG RLP+L+ ++ +++ TGR++S ++A+ G+VN V + A E+AQ++ P+AI K E+ + + Y LH+ED LEG AFAEKR P + G Sbjct: 113 ALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQSELMDSARELAQQLVNSAPLAIAALKEIYRATSEMPVEEGYRYIRSGVLKHYPSVLHSEDALEGPQAFAEKRDPVWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_SALEP (Carnitinyl-CoA dehydratase OS=Salmonella enteritidis PT4 (strain P125109) GN=caiD PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 8.179e-20 Identity = 53/148 (35.81%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D +C E A LPE L I+P +GG RLP+L+ ++ +++ TGR++S ++A+ G+VN V + A E+AQ++ P+AI K E+ + + Y LH+ED LEG AFAEKR P + G Sbjct: 113 ALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQSELMDSARELAQQLVNSAPLAIAALKEIYRATSEMPVEEGYRYIRSGVLKHYPSVLHSEDALEGPQAFAEKRDPVWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_SALDC (Carnitinyl-CoA dehydratase OS=Salmonella dublin (strain CT_02021853) GN=caiD PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 8.179e-20 Identity = 53/148 (35.81%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D +C E A LPE L I+P +GG RLP+L+ ++ +++ TGR++S ++A+ G+VN V + A E+AQ++ P+AI K E+ + + Y LH+ED LEG AFAEKR P + G Sbjct: 113 ALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQSELMDSARELAQQLVNSAPLAIAALKEIYRATSEMPVEEGYRYIRSGVLKHYPSVLHSEDALEGPQAFAEKRDPVWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_PROSL (Carnitinyl-CoA dehydratase OS=Proteus sp. (strain LE138) GN=caiD PE=1 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 1.395e-19 Identity = 51/148 (34.46%), Postives = 81/148 (54.73%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D+ IC + A LPE L I+P +GG RLP+ + ++ +++ TGR+++ ++A+ G+ N V A + A E+A +I P+A+ K E+ + +L + Y LH+ED LEG AFAEKR P++ G Sbjct: 113 ALAADMIICSDNASFALPEAQLGIVPDSGGVLRLPKRLPPAIVNEMLMTGRRMNAQEALRWGIANRVVSATELMDSARELADQIANSAPLAVAALKEIYRATSELSIEEGYKLMRSGVLKYYPRVLHSEDALEGPLAFAEKRSPEWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_PROMH (Carnitinyl-CoA dehydratase OS=Proteus mirabilis (strain HI4320) GN=caiD PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.395e-19 Identity = 51/148 (34.46%), Postives = 81/148 (54.73%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D+ IC + A LPE L I+P +GG RLP+ + ++ +++ TGR+++ ++A+ G+ N V A + A E+A +I P+A+ K E+ + +L + Y LH+ED LEG AFAEKR P++ G Sbjct: 113 ALAADMIICSDNASFALPEAQLGIVPDSGGVLRLPKRLPPAIVNEMLMTGRRMNAQEALRWGIANRVVSATELMDSARELADQIANSAPLAVAALKEIYRATSELSIEEGYKLMRSGVLKYYPRVLHSEDALEGPLAFAEKRSPEWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_SHIFL (Carnitinyl-CoA dehydratase OS=Shigella flexneri GN=caiD PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 4.059e-19 Identity = 50/148 (33.78%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEE----ECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D +C + A LPE L I+P +GG RLP+++ ++ +++ TGR++ ++A+ G+VN V + A E+AQ++ P+AI K E+ + A + Y LH+ED +EG AFAEKR P + G Sbjct: 113 ALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPTIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKG 260
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CAID_SALAR (Carnitinyl-CoA dehydratase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=caiD PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 4.059e-19 Identity = 52/152 (34.21%), Postives = 84/152 (55.26%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKR--------AITKGLEVDMASALELEEECYIGTLHTEDRLEGLAAFAEKRKPKYTG 433 ALA D IC + A LPE L I+P +GG RLP+++ ++ D++ TGR+++ ++A+ G+VN V + A E+A+++ Q P+A+ K ++ +G + +L Y LH+ED LEG AFAEKR P++ G Sbjct: 113 ALAADFIICADHASFALPEAKLGIVPDSGGVLRLPKILPPAIVNDMVMTGRRMTAEEALRWGVVNRVVSPHELLDSARELARQLVQSAPLAVAALKEITRTTRDMSVEEGYRYIRSGSL----RHYPAVLHSEDALEGPLAFAEKRDPEWKG 260 The following BLAST results are available for this feature:
BLAST of CX300207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300207 ID=CX300207; Name=CX300207; organism=Citrus clementina; type=EST; length=448bpback to top |