CX300229
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300229 vs. ExPASy Swiss-Prot
Match: RK14_CRYJA (50S ribosomal protein L14, chloroplastic OS=Cryptomeria japonica GN=rpl14 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.919e-25 Identity = 53/70 (75.71%), Postives = 64/70 (91.43%), Query Frame = -3 Query: 347 ERSEVIRAVIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL 556 E SEV+RAV++RTCKEL+R +GMIIR DDNAAVVID +GNP+GTRVFG++ ELR+LNFTKI+SLAPEVL Sbjct: 53 EESEVVRAVVIRTCKELKRSDGMIIRSDDNAAVVIDQKGNPRGTRVFGSVTEELRELNFTKIISLAPEVL 122
BLAST of CX300229 vs. ExPASy Swiss-Prot
Match: RK14_ZYGCR (50S ribosomal protein L14, chloroplastic OS=Zygnema circumcarinatum GN=rpl14 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.980e-25 Identity = 54/70 (77.14%), Postives = 65/70 (92.86%), Query Frame = -3 Query: 347 ERSEVIRAVIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL 556 ++SE++RAVIVRT K L+RDNGM++R+DDNAAVVI+ EGNP+GTRVFG +ARELR LNFTKIVSLAPEVL Sbjct: 53 KKSEIVRAVIVRTRKGLKRDNGMVLRFDDNAAVVINQEGNPRGTRVFGPVARELRDLNFTKIVSLAPEVL 122
BLAST of CX300229 vs. ExPASy Swiss-Prot
Match: RK14_MESVI (50S ribosomal protein L14, chloroplastic OS=Mesostigma viride GN=rpl14 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.980e-25 Identity = 54/70 (77.14%), Postives = 64/70 (91.43%), Query Frame = -3 Query: 347 ERSEVIRAVIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL 556 ++SEV+RAV+VRTCK +RR+NGM IR+DDNAAVVI+ +GNPKGTRVFG +ARELR NFTKIVSLAPEVL Sbjct: 53 KKSEVVRAVVVRTCKGIRRENGMTIRFDDNAAVVINKDGNPKGTRVFGPVARELRDRNFTKIVSLAPEVL 122
BLAST of CX300229 vs. ExPASy Swiss-Prot
Match: RK14_CHAGL (50S ribosomal protein L14, chloroplastic OS=Chaetosphaeridium globosum GN=rpl14 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 6.504e-25 Identity = 52/70 (74.29%), Postives = 65/70 (92.86%), Query Frame = -3 Query: 347 ERSEVIRAVIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL 556 ++SEV+RAVIVRTCKEL+R NG I+R+D+NAAV+I+ EGNP+GTR+FG +ARELR+ NFTKIVSLAPEVL Sbjct: 53 KKSEVVRAVIVRTCKELKRKNGTILRFDENAAVIINQEGNPRGTRIFGPVARELREANFTKIVSLAPEVL 122
BLAST of CX300229 vs. ExPASy Swiss-Prot
Match: RR8_CITSI (30S ribosomal protein S8, chloroplastic OS=Citrus sinensis GN=rps8 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 8.494e-25 Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = -2 Query: 3 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVE--NKKEFLVL 185 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVE NKKEFLVL Sbjct: 1 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVL 63
BLAST of CX300229 vs. ExPASy Swiss-Prot
Match: RK14_CHLAT (50S ribosomal protein L14, chloroplastic OS=Chlorokybus atmophyticus GN=rpl14 PE=3 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.109e-24 Identity = 56/70 (80.00%), Postives = 63/70 (90.00%), Query Frame = -3 Query: 347 ERSEVIRAVIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL 556 +RSEV+RAV+VRT K LRRDNGM IR+DDNAAVVI+ EGNP+GTRVFG +ARELR NFTKIVSLAPEVL Sbjct: 53 KRSEVVRAVVVRTRKGLRRDNGMTIRFDDNAAVVINKEGNPRGTRVFGPVARELRDRNFTKIVSLAPEVL 122
BLAST of CX300229 vs. ExPASy Swiss-Prot
Match: RL14_GLOVI (50S ribosomal protein L14 OS=Gloeobacter violaceus GN=rplN PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.228e-24 Identity = 51/70 (72.86%), Postives = 64/70 (91.43%), Query Frame = -3 Query: 347 ERSEVIRAVIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL 556 ++SEV+RAV+VRT + +RRDNGM+IR+DDNAAV+ID GNP+GTRVFG +ARELR+ NFTKI+SLAPEVL Sbjct: 64 KKSEVVRAVVVRTRQAIRRDNGMVIRFDDNAAVIIDKNGNPRGTRVFGPVARELREKNFTKIISLAPEVL 133
BLAST of CX300229 vs. ExPASy Swiss-Prot
Match: RK14_CHLRE (50S ribosomal protein L14, chloroplastic OS=Chlamydomonas reinhardtii GN=rpl14 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.227e-23 Identity = 53/70 (75.71%), Postives = 63/70 (90.00%), Query Frame = -3 Query: 347 ERSEVIRAVIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL 556 +RS+++RAVIVRT K +RR+NGM IR+DDNAAV+I+ EGNP+GTRVFG IARELR NFTKIVSLAPEVL Sbjct: 53 KRSDIVRAVIVRTRKGIRRENGMAIRFDDNAAVIINKEGNPRGTRVFGPIARELRDKNFTKIVSLAPEVL 122
BLAST of CX300229 vs. ExPASy Swiss-Prot
Match: RK14_ANTFO (50S ribosomal protein L14, chloroplastic OS=Anthoceros formosae GN=rpl14 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.733e-23 Identity = 51/70 (72.86%), Postives = 59/70 (84.29%), Query Frame = -3 Query: 347 ERSEVIRAVIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL 556 ++SEV+RAVIVRTCKE+RRDNGM IR+DDN A + EGNPKGTRVFG +ARE R NFTKI+ LAPEVL Sbjct: 53 KKSEVVRAVIVRTCKEVRRDNGMTIRFDDNVAATTNQEGNPKGTRVFGPVARESRGYNFTKIIPLAPEVL 122
BLAST of CX300229 vs. ExPASy Swiss-Prot
Match: RK14_WELMI (50S ribosomal protein L14, chloroplastic OS=Welwitschia mirabilis GN=rpl14 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 4.661e-23 Identity = 50/70 (71.43%), Postives = 61/70 (87.14%), Query Frame = -3 Query: 347 ERSEVIRAVIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL 556 E SE++RAVI+RT KE +RD+GM IR DDNAA++ID +GNPKGTRVFG + +ELRQ NFTKI+SLAPEVL Sbjct: 53 EESEIVRAVIIRTSKEFQRDDGMRIRSDDNAAIIIDQKGNPKGTRVFGPVLQELRQYNFTKIISLAPEVL 122 The following BLAST results are available for this feature:
BLAST of CX300229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300229 ID=CX300229; Name=CX300229; organism=Citrus clementina; type=EST; length=558bpback to top |