CX300230
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300230 vs. ExPASy Swiss-Prot
Match: RS27A_KLULA (40S ribosomal protein S27a OS=Kluyveromyces lactis GN=ubi3 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.464e-14 Identity = 36/53 (67.92%), Postives = 40/53 (75.47%), Query Frame = 1 Query: 28 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQK 186 LAVL +YKVDD GKV +LRKECPN CG G F+ANH DR YCGKC T+ QK Sbjct: 24 LAVLNYYKVDDEGKVAKLRKECPN--CGPGIFLANHGDRFYCGKCHSTFATQK 74
BLAST of CX300230 vs. ExPASy Swiss-Prot
Match: RS27A_PLUXY (40S ribosomal protein S27a OS=Plutella xylostella PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.261e-14 Identity = 33/52 (63.46%), Postives = 42/52 (80.77%), Query Frame = 1 Query: 28 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQ 183 LAVL+FYKVD++GK+ RLR+EC + +CGAG FMA DRHYCGKC T V++ Sbjct: 24 LAVLRFYKVDENGKIHRLRRECTSEQCGAGVFMAVMEDRHYCGKCHRTMVFK 75
BLAST of CX300230 vs. ExPASy Swiss-Prot
Match: RS27A_SPOFR (40S ribosomal protein S27a OS=Spodoptera frugiperda PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.259e-14 Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 28 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQ 183 LAVL+FYKVD++GK+ RLR+EC +CGAG FMA DRHYCGKC T V++ Sbjct: 24 LAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHSTMVFK 75
BLAST of CX300230 vs. ExPASy Swiss-Prot
Match: RS27A_MANSE (40S ribosomal protein S27a OS=Manduca sexta PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.259e-14 Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 28 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQ 183 LAVL+FYKVD++GK+ RLR+EC +CGAG FMA DRHYCGKC T V++ Sbjct: 24 LAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHSTMVFK 75
BLAST of CX300230 vs. ExPASy Swiss-Prot
Match: RS27B_SCHPO (40S ribosomal protein S27b OS=Schizosaccharomyces pombe GN=ubi5 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.239e-13 Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 1 Query: 28 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLT 171 LAVL++YKV+D G V+RLR+ECPN CGA TFMANH DR YCG+C LT Sbjct: 24 LAVLKYYKVEDDGSVKRLRRECPN--CGASTFMANHKDRLYCGRCHLT 69
BLAST of CX300230 vs. ExPASy Swiss-Prot
Match: RS27A_SCHPO (40S ribosomal protein S27a OS=Schizosaccharomyces pombe GN=ubi3 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.239e-13 Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 1 Query: 28 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLT 171 LAVL++YKV+D G V+RLR+ECPN CGA TFMANH DR YCG+C LT Sbjct: 24 LAVLKYYKVEDDGSVKRLRRECPN--CGASTFMANHKDRLYCGRCHLT 69
BLAST of CX300230 vs. ExPASy Swiss-Prot
Match: RS27A_CAEBR (40S ribosomal protein S27a OS=Caenorhabditis briggsae GN=ubl-1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.618e-13 Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 1 Query: 28 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 189 LAVL++YKVD++GK+ RLRKEC CG G FMA H +RHYCG+C T V A Sbjct: 24 LAVLKYYKVDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCHDTLVVDTA 77
BLAST of CX300230 vs. ExPASy Swiss-Prot
Match: RS27A_CAEEL (40S ribosomal protein S27a OS=Caenorhabditis elegans GN=ubl-1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.114e-13 Identity = 31/54 (57.41%), Postives = 39/54 (72.22%), Query Frame = 1 Query: 28 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 189 LAVL++YK+D++GK+ RLRKEC CG G FMA H +RHYCG+C T V A Sbjct: 24 LAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCHDTLVVDTA 77
BLAST of CX300230 vs. ExPASy Swiss-Prot
Match: RS37_YEAST (40S ribosomal protein S31 OS=Saccharomyces cerevisiae GN=UBI3 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.709e-13 Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = 1 Query: 28 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTY 174 LAVL +YKVD GKV +LR+EC N CGAG F+ANH DR YCGKC Y Sbjct: 24 LAVLSYYKVDAEGKVTKLRRECSNPTCGAGVFLANHKDRLYCGKCHSVY 72
BLAST of CX300230 vs. ExPASy Swiss-Prot
Match: RS27A_DICDI (40S ribosomal protein S27a OS=Dictyostelium discoideum GN=ubqC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.986e-12 Identity = 29/50 (58.00%), Postives = 38/50 (76.00%), Query Frame = 1 Query: 28 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYV 177 LAVL++YK D++GK++R+ +ECP CGAG FMA H +R YCGKC T V Sbjct: 25 LAVLKYYKFDENGKIKRVLRECPAETCGAGVFMAQHANRQYCGKCHSTLV 74 The following BLAST results are available for this feature:
BLAST of CX300230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300230 ID=CX300230; Name=CX300230; organism=Citrus clementina; type=EST; length=302bpback to top |