CX300234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300234 vs. ExPASy Swiss-Prot
Match: GLGA_RHIL3 (Glycogen synthase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=glgA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.740e-11 Identity = 38/96 (39.58%), Postives = 54/96 (56.25%), Query Frame = 1 Query: 1 RFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 285 RFEPCGL QL+ +RYG VPIVA TGGL DTV + + + PV + +RRA+ Y + L ++ K GM D+SW+ A+++ Sbjct: 374 RFEPCGLTQLYGLRYGCVPIVARTGGLNDTVIDANHAALAAKVATGIQFA-PVTETGMLQAIRRAMHFYQDRKLWTQLQKQGMKSDVSWEKSAERY 468
BLAST of CX300234 vs. ExPASy Swiss-Prot
Match: GLGA_ANADF (Glycogen synthase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=glgA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.740e-11 Identity = 42/97 (43.30%), Postives = 57/97 (58.76%), Query Frame = 1 Query: 1 RFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWE 288 RFEPCGL Q++++RYGT+P+V + GGL DTVE+ F G+ G+ P A+ VRRAL + +A MM GMA D SW A+ +E Sbjct: 375 RFEPCGLNQMYSLRYGTIPVVRAVGGLEDTVED-FDGWSRGT-GFKFRDYHP---QAMLLAVRRALEAHRDRRAWRAMMLRGMALDFSWDRSAQAYE 466
BLAST of CX300234 vs. ExPASy Swiss-Prot
Match: GLGA2_NITOC (Glycogen synthase 2 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=glgA2 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.740e-11 Identity = 43/105 (40.95%), Postives = 57/105 (54.29%), Query Frame = 1 Query: 1 RFEPCGLIQLHAMRYGTVPIVASTGGLVDTV---------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKW 285 RFEPCGL QL+A+RYGTVPI TGGL DT+ +E TGF S +A+ T ++RALA Y ++ + GMAQ+ SW+ AK + Sbjct: 378 RFEPCGLTQLYALRYGTVPIARRTGGLSDTIVDATEKNLRQELATGFTFTESS----------PSALLTAIQRALACYAQSRQWRRLALTGMAQNFSWQTSAKAY 472
BLAST of CX300234 vs. ExPASy Swiss-Prot
Match: GLGA1_RHIRD (Glycogen synthase 1 OS=Rhizobium radiobacter GN=glgA1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.740e-11 Identity = 38/93 (40.86%), Postives = 52/93 (55.91%), Query Frame = 1 Query: 1 RFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPA 276 RFEPCGL QL+A+RYG +P+VA TGGL DTV + + S + PV + + +RR + Y L +M K GM D+SW+ A Sbjct: 374 RFEPCGLTQLYALRYGCIPVVARTGGLADTVIDA-NHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMKSDVSWEKSA 465
BLAST of CX300234 vs. ExPASy Swiss-Prot
Match: GLGA1_AGRT5 (Glycogen synthase 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=glgA1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.740e-11 Identity = 38/93 (40.86%), Postives = 52/93 (55.91%), Query Frame = 1 Query: 1 RFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPA 276 RFEPCGL QL+A+RYG +P+VA TGGL DTV + + S + PV + + +RR + Y L +M K GM D+SW+ A Sbjct: 374 RFEPCGLTQLYALRYGCIPVVARTGGLADTVIDA-NHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMKSDVSWEKSA 465
BLAST of CX300234 vs. ExPASy Swiss-Prot
Match: GLGA_SYNPX (Glycogen synthase OS=Synechococcus sp. (strain WH8102) GN=glgA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.578e-11 Identity = 49/134 (36.57%), Postives = 66/134 (49.25%), Query Frame = 1 Query: 1 RFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 381 RFEPCG+ QL+AMRYG+VP+V GGLVDTV + TGF F +PVD + VR A + E+ K GM QD SW A ++ ++ +V G EP D + ++ A P Sbjct: 356 RFEPCGISQLYAMRYGSVPVVRKVGGLVDTVPPHSPADASGTGFCFDRF-------EPVDF--YTALVRAWEAYRHRDSWQELQKRGMQQDYSWDRSAIDYD--VMYRDVCGLKEPTPDAAMVEQFSQGQAADP 478
BLAST of CX300234 vs. ExPASy Swiss-Prot
Match: GLGA_GEOSF (Glycogen synthase OS=Geobacter sp. (strain FRC-32) GN=glgA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.578e-11 Identity = 42/99 (42.42%), Postives = 55/99 (55.56%), Query Frame = 1 Query: 1 RFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 291 R+EPCGL Q+ A+RYG VP+V TGGL DT+ +E + FS D A+ + RA+ Y +A +MMK GMA D SW A K+EE Sbjct: 380 RYEPCGLGQMIALRYGAVPVVRKTGGLADTIFDERDQPKEPNGFS-----FDEYTPEALWEALSRAVEAYSDKAAWKKMMKRGMAGDFSWNTSALKYEE 473
BLAST of CX300234 vs. ExPASy Swiss-Prot
Match: GLGA_ELUMP (Glycogen synthase OS=Elusimicrobium minutum (strain Pei191) GN=glgA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11 Identity = 38/100 (38.00%), Postives = 59/100 (59.00%), Query Frame = 1 Query: 1 RFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWEE 291 RFEPCGL Q+ +MRYGTVPIV+ GGL+DTV+ +G T + G F ++ + ++ AL Y + ++KNGM +D SW A+++++ Sbjct: 381 RFEPCGLSQMISMRYGTVPIVSRVGGLLDTVKGYDGITKYATGFFILE------FSETGIERSLDYALKYYQDKRCWGMLIKNGMEKDFSWTKSAQEYQD 474
BLAST of CX300234 vs. ExPASy Swiss-Prot
Match: GLGA_CLOPH (Glycogen synthase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=glgA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11 Identity = 43/104 (41.35%), Postives = 57/104 (54.81%), Query Frame = 1 Query: 4 FEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA--EMMKNGMAQDLSWKGPAKKWEE 291 FEPCGL QL ++RYGTVPIV TGGLVDTV E TGF +++ + T+R A Y + +++ GMA+D SWK A+K+EE Sbjct: 380 FEPCGLSQLMSLRYGTVPIVRETGGLVDTVEPYNQHESTGTGFTFKNYNAH----------EMLYTIRFAKEIYQDKKREWNKIIDRGMAKDFSWKTSARKYEE 473
BLAST of CX300234 vs. ExPASy Swiss-Prot
Match: GLGA2_BRAJA (Glycogen synthase 2 OS=Bradyrhizobium japonicum GN=glgA2 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.104e-11 Identity = 42/99 (42.42%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 1 RFEPCGLIQLHAMRYGTVPIVASTGGLVDTV----EEG--FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA-LATYGTQALAEMMKNGMAQDLSWKGPA 276 RFEPCGL QL A+RYG VPIV+ GGL DT+ E G TGF+ G PV A++ T+R+A A + ++ +NG+A D+SW+ A Sbjct: 378 RFEPCGLTQLCALRYGAVPIVSRVGGLEDTIVDIGEAGREATGFKFG----------PVTADALAGTLRKANTAFHDKLTWRQLQRNGLATDVSWRSRA 466 The following BLAST results are available for this feature:
BLAST of CX300234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300234 ID=CX300234; Name=CX300234; organism=Citrus clementina; type=EST; length=591bpback to top |