CX300236
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300236 vs. ExPASy Swiss-Prot
Match: KCS16_ARATH (3-ketoacyl-CoA synthase 16 OS=Arabidopsis thaliana GN=KCS16 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 9.665e-30 Identity = 70/194 (36.08%), Postives = 104/194 (53.61%), Query Frame = 1 Query: 1 RTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFGYVIQSYYESRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLGLDEYDLEPARMALHRFGN 582 + ++N A+VVSTE++ N Y G KSM+++N LFR GG ++LL+N + +A +L VR H G++D +YEC Q ED+ G G +N+ L P +LP+ E+F + ++ + + P+ K EHFC+H GGRA+ID K L L D+E +RM LHRFGN Sbjct: 236 QVHRNTYALVVSTENITQNLYMGNNKSMLVTNCLFRIGGAAILLSNRSIDRKRAKYELVHTVRVHTGADDRSYECATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPISEKFHFFVRFVKKKFLNPKLKHYIPD--------FKLAFEHFCIHAGGRALIDEMEKNLHLTPLDVEASRMTLHRFGN 421
BLAST of CX300236 vs. ExPASy Swiss-Prot
Match: KCS4_ARATH (3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.649e-29 Identity = 71/192 (36.98%), Postives = 105/192 (54.69%), Query Frame = 1 Query: 7 YKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFGYVIQSYYESRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLGLDEYDLEPARMALHRFGN 582 ++N A+VVSTE++ NWY G +KSM++ N LFR GG ++LL+N K ++ +L +VRTH G++D+A+ C Q +D G G N+ L P +LP+ EQ ++ + + K + K + + + K EHFC+H GGRAVID K L L +E +RM LHRFGN Sbjct: 265 HRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYRLVHVVRTHRGADDKAFRCVYQEQDDTGRTGVSLSKDLMAIAGETLKTNITTLGPLVLPISEQI-----LFFMTLVVKKLFNGKVKPYIP---DFKLAFEHFCIHAGGRAVIDELEKNLQLSPVHVEASRMTLHRFGN 448
BLAST of CX300236 vs. ExPASy Swiss-Prot
Match: KCS18_ARATH (3-ketoacyl-CoA synthase 18 OS=Arabidopsis thaliana GN=FAE1 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.649e-29 Identity = 73/192 (38.02%), Postives = 105/192 (54.69%), Query Frame = 1 Query: 7 YKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFGYVIQSYYESRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLGLDEYDLEPARMALHRFGN 582 +KN A+VVSTE++ Y G +SMM+SN LFR GG ++LL+N + ++ KL VRTH G++D+++ C Q +D+ G G T N+ L P ILPL E+F ++ + + K K + + K ++HFC+H GGRAVID K LGL D+E +R LHRFGN Sbjct: 240 HKNTYALVVSTENITQGIYAGENRSMMVSNCLFRVGGAAILLSNKSGDRRRSKYKLVHTVRTHTGADDKSFRCVQQEDDESGKIGVCLSKDITNVAGTTLTKNIATLGPLILPLSEKF-----LFFATFVAKKLLKDKIKHYYVP--DFKLAVDHFCIHAGGRAVIDELEKNLGLSPIDVEASRSTLHRFGN 424
BLAST of CX300236 vs. ExPASy Swiss-Prot
Match: KCS6_ARATH (3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana GN=CUT1 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 8.182e-29 Identity = 71/194 (36.60%), Postives = 107/194 (55.15%), Query Frame = 1 Query: 1 RTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFGYVIQSYYESRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLGLDEYDLEPARMALHRFGN 582 + + N AI+VSTE + PN+Y G E++M+L N LFR G ++ ++N R+ + +A KL+ LVRTH G++D+++ C + ED++GH G N+ + P +LP EQ + S I + + K + + + K EHFC+H GGRAVID K L L +E +RM LHRFGN Sbjct: 240 QVHPNSNAIIVSTEIITPNYYQGNERAMLLPNCLFRMGAAAIHMSNRRSDRWRAKYKLSHLVRTHRGADDKSFYCVYEQEDKEGHVGINLSKDLMAIAGEALKANITTIGPLVLPASEQL-----LFLTSLIGRKIFNPKWKPYIP---DFKLAFEHFCIHAGGRAVIDELQKNLQLSGEHVEASRMTLHRFGN 425
BLAST of CX300236 vs. ExPASy Swiss-Prot
Match: KCS9_ARATH (3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana GN=KCS9 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.381e-28 Identity = 68/194 (35.05%), Postives = 106/194 (54.64%), Query Frame = 1 Query: 1 RTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFGYVIQSYYESRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLGLDEYDLEPARMALHRFGN 582 + ++N A+VVSTE++ NWY G +K+M++ N LFR GG ++LL+N + ++ KL VRTH G+ ++A+ C Q +D G G N+ L P +LP+ EQ ++ + + K ++K + + + K +HFC+H GGRAVID K L L + +E +RM LHRFGN Sbjct: 259 QVHRNTYAVVVSTENITQNWYFGNKKAMLIPNCLFRVGGSAILLSNKGKDRRRSKYKLVHTVRTHKGAVEKAFNCVYQEQDDNGKTGVSLSKDLMAIAGEALKANITTLGPLVLPISEQI-----LFFMTLVTKKLFNSKLKPYIP---DFKLAFDHFCIHAGGRAVIDELEKNLQLSQTHVEASRMTLHRFGN 444
BLAST of CX300236 vs. ExPASy Swiss-Prot
Match: KCS17_ARATH (3-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana GN=KCS17 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 9.046e-28 Identity = 70/192 (36.46%), Postives = 105/192 (54.69%), Query Frame = 1 Query: 13 NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHP--GFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFGYVIQSYYESRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLGLDEYDLEPARMALHRFGN 582 N A+VVSTE++ NWY G ++SM+LSN +FR GG ++LL+N + + ++ +L VRTH GS+D A+ C Q ED + G N+ L P +LP+ EQ ++ + + + + K + + K EHFC+H GGRAV+D K L L E+ +EP+RM L+RFGN Sbjct: 260 NSYALVVSTENITLNWYLGNDRSMLLSNCIFRMGGAAVLLSNRSSDRCRSKYQLIHTVRTHKGSDDNAFNCVYQREDNDDNKQIGVSLSKNLMAIAGEALKTNITTLGPLVLPMSEQL-----LFFATLVARKVFNVK--KIKPYIPDFKLAFEHFCIHAGGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGN 444
BLAST of CX300236 vs. ExPASy Swiss-Prot
Match: KCS19_ARATH (3-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana GN=KCS19 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.543e-27 Identity = 70/194 (36.08%), Postives = 105/194 (54.12%), Query Frame = 1 Query: 13 NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVED----QQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFGYVIQSYYESRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLGLDEYDLEPARMALHRFGN 582 N A+VVSTE++ NWY G ++SM+LSN +FR GG ++LL+N + + ++ +L VRTH G++D A+ C Q ED + G G N+ L P +LP+ EQ ++ + + + K + + K EHFC+H GGRAV+D K L L E+ +EP+RM L+RFGN Sbjct: 266 NSYALVVSTENITLNWYLGNDRSMLLSNCIFRMGGAAVLLSNRSSDRSRSKYQLIHTVRTHKGADDNAFGCVYQREDNNAEETGKIGVSLSKNLMAIAGEALKTNITTLGPLVLPMSEQL-----LFFATLVARKVFKVK--KIKPYIPDFKLAFEHFCIHAGGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGN 452
BLAST of CX300236 vs. ExPASy Swiss-Prot
Match: KCS2_ARATH (Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis thaliana GN=KCS2 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.228e-26 Identity = 68/192 (35.42%), Postives = 103/192 (53.65%), Query Frame = 1 Query: 7 YKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFGYVIQSYYESRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLGLDEYDLEPARMALHRFGN 582 ++N A+VVSTE++ NWY G +K+M++ N LFR GG ++LL+N + ++ KL VRTH GS++ A+ C Q +D+ G N+ L P +LP+ EQ ++ + + K + K + + K ++HFC+H GGRAVID K L L +E +RM LHRFGN Sbjct: 235 HRNTFALVVSTENITQNWYFGNKKAMLIPNCLFRVGGSAVLLSNKPLDRKRSKYKLVHTVRTHKGSDENAFNCVYQEQDECLKTGVSLSKDLMAIAGEALKTNITSLGPLVLPISEQI-----LFFATFVAKRLFNDKKKKPYIP--DFKLALDHFCIHAGGRAVIDELEKSLKLSPKHVEASRMTLHRFGN 419
BLAST of CX300236 vs. ExPASy Swiss-Prot
Match: KCS11_ARATH (3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana GN=KCS11 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.228e-26 Identity = 66/190 (34.74%), Postives = 101/190 (53.16%), Query Frame = 1 Query: 13 NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFGYVIQSYYESRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLGLDEYDLEPARMALHRFGN 582 N A+V+S E++ NWY G ++S ++SN LFR GG ++LL+N R + ++ +L VRTH G++D+ + C Q ED G N+ L P +LP EQ ++ + + + K + + + K EHFC+H GGRAV+D K L L E+ +EP+RM L+RFGN Sbjct: 255 NTYAMVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNKRWDRRRSKYELVDTVRTHKGADDKCFGCITQEEDSASKIGVTLSKELMAVAGDALKTNITTLGPLVLPTSEQL-----LFFATLVGRKLFKMKIKPYIP---DFKLAFEHFCIHAGGRAVLDELEKNLKLTEWHMEPSRMTLYRFGN 436
BLAST of CX300236 vs. ExPASy Swiss-Prot
Match: KCS10_ARATH (3-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana GN=FDH PE=1 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 3.801e-26 Identity = 68/208 (32.69%), Postives = 104/208 (50.00%), Query Frame = 1 Query: 13 NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQ---FGYVIQSYYESRIRKSTSST-------KPEAVLGAGLNL--------KAGIEHFCLHPGGRAVIDGTGKGLGLDEYDLEPARMALHRFGN 582 N A+VVSTE +G NWY G +KSM++ N FR G +++L+N R A +L +VRTH ++D ++ Q ED+QG G + N+ L P +LP EQ F +++ + + ST+++ K + + +L K EHFC H + V++ K LGL E ++E +RM LHRFGN Sbjct: 276 NSYAVVVSTEMVGYNWYVGSDKSMVIPNCFFRMGCSAVMLSNRRRDFRHAKYRLEHIVRTHKAADDRSFRSVYQEEDEQGFKGLKISRDLMEVGGEALKTNITTLGPLVLPFSEQLLFFAALLRRTFSPAAKTSTTTSFSTSATAKTNGIKSSSSDLSKPYIPDYKLAFEHFCFHAASKVVLEELQKNLGLSEENMEASRMTLHRFGN 483 The following BLAST results are available for this feature:
BLAST of CX300236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300236 ID=CX300236; Name=CX300236; organism=Citrus clementina; type=EST; length=583bpback to top |