CX300239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300239 vs. ExPASy Swiss-Prot
Match: PROF1_AMBAR (Profilin-1 OS=Ambrosia artemisiifolia GN=D106 PE=1 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 2.992e-48 Identity = 89/101 (88.12%), Postives = 96/101 (95.05%), Query Frame = 1 Query: 1 GKVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 303 G VWAQS FPQ+KPEEITGIMNDFNEPG+LAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKT+ +LIIGIYDEPMTPGQCNM+VER GDYL++QG Sbjct: 30 GVVWAQSATFPQVKPEEITGIMNDFNEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTTMSLIIGIYDEPMTPGQCNMLVERPGDYLLEQG 130
BLAST of CX300239 vs. ExPASy Swiss-Prot
Match: PROF2_SOLLC (Profilin-2 OS=Solanum lycopersicum PE=1 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 5.103e-48 Identity = 91/102 (89.22%), Postives = 94/102 (92.16%), Query Frame = 1 Query: 1 GKVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 306 G VWAQS NFPQ KPEEITGIMNDF PGTLAPTGLYLGGTKYMVIQGEP AVIRGKKGPGG+TIKKT+ ALIIGIYDEPMTPGQCNMIVERLGDYLI+Q L Sbjct: 30 GTVWAQSANFPQFKPEEITGIMNDFAVPGTLAPTGLYLGGTKYMVIQGEPEAVIRGKKGPGGITIKKTNQALIIGIYDEPMTPGQCNMIVERLGDYLIEQSL 131
BLAST of CX300239 vs. ExPASy Swiss-Prot
Match: PROF_CAPAN (Profilin OS=Capsicum annuum PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 1.939e-47 Identity = 89/102 (87.25%), Postives = 93/102 (91.18%), Query Frame = 1 Query: 1 GKVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 306 G VWAQS FPQ KPEEIT IMNDF EPGTLAPTGLYLGGTKYMVIQGE GAVIRGKKGPGG+T+KKT+ ALIIGIYDEPMTPGQCNMIVERLGDYLI+Q L Sbjct: 30 GSVWAQSATFPQFKPEEITAIMNDFAEPGTLAPTGLYLGGTKYMVIQGEAGAVIRGKKGPGGITVKKTNQALIIGIYDEPMTPGQCNMIVERLGDYLIEQSL 131
BLAST of CX300239 vs. ExPASy Swiss-Prot
Match: PROF_LITCN (Profilin OS=Litchi chinensis PE=1 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 2.533e-47 Identity = 86/102 (84.31%), Postives = 94/102 (92.16%), Query Frame = 1 Query: 1 GKVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 306 G VWAQS NFPQ KP EI IM DF+EPG+LAPTGL+LGGTKYMVIQGEPGAVIRGKKGPGG+T+KKT+ ALIIGIYDEPMTPGQCNM+VERLGDYL+DQGL Sbjct: 30 GSVWAQSANFPQFKPAEIAAIMKDFDEPGSLAPTGLHLGGTKYMVIQGEPGAVIRGKKGPGGITVKKTTQALIIGIYDEPMTPGQCNMVVERLGDYLVDQGL 131
BLAST of CX300239 vs. ExPASy Swiss-Prot
Match: PROF_ARAHY (Profilin OS=Arachis hypogaea PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 9.624e-47 Identity = 88/102 (86.27%), Postives = 94/102 (92.16%), Query Frame = 1 Query: 1 GKVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 306 G VWAQS +FPQ KPEEIT IMNDF EPG+LAPTGLYLGGTKYMVIQGEPGA+I GKKGPGGVTI+KT+ ALIIGIYD+PMTPGQCNMIVERLGDYLID GL Sbjct: 30 GGVWAQSSHFPQFKPEEITAIMNDFAEPGSLAPTGLYLGGTKYMVIQGEPGAIIPGKKGPGGVTIEKTNQALIIGIYDKPMTPGQCNMIVERLGDYLIDTGL 131
BLAST of CX300239 vs. ExPASy Swiss-Prot
Match: PROF1_HEVBR (Profilin-1 OS=Hevea brasiliensis PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 1.642e-46 Identity = 86/102 (84.31%), Postives = 95/102 (93.14%), Query Frame = 1 Query: 1 GKVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 306 G VWAQS NFPQ K EEIT IM+DF+EPGTLAPTGL+LGGTKYMVIQGE GAVIRGKKGPGGVT++KT+ ALIIGIYDEPMTPGQCNMIVERLGDYL++QG+ Sbjct: 30 GSVWAQSSNFPQFKSEEITAIMSDFDEPGTLAPTGLHLGGTKYMVIQGEAGAVIRGKKGPGGVTVRKTNQALIIGIYDEPMTPGQCNMIVERLGDYLLEQGM 131
BLAST of CX300239 vs. ExPASy Swiss-Prot
Match: PROF5_MAIZE (Profilin-5 OS=Zea mays GN=PRO5 PE=1 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 2.800e-46 Identity = 83/101 (82.18%), Postives = 94/101 (93.07%), Query Frame = 1 Query: 1 GKVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 303 G VWAQSENFP+LKPEE+ G++ DF+EPGTLAPTGL++GGTKYMVIQGEPG VIRGKKG GG+TIKKT +LIIGIYDEPMTPGQCNM+VERLGDYLI+QG Sbjct: 30 GSVWAQSENFPELKPEEVAGMIKDFDEPGTLAPTGLFVGGTKYMVIQGEPGVVIRGKKGTGGITIKKTGMSLIIGIYDEPMTPGQCNMVVERLGDYLIEQG 130
BLAST of CX300239 vs. ExPASy Swiss-Prot
Match: PROF_CHEAL (Profilin OS=Chenopodium album PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 3.657e-46 Identity = 84/102 (82.35%), Postives = 95/102 (93.14%), Query Frame = 1 Query: 1 GKVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 306 G VWAQS +FPQLKPEE++ IM DFNEPG+LAPTGL+LGGTKYMVIQGEPG VIRGKKGPGGVTIKKT+ ALIIGIY EPMTPGQCNM+VER+GDYL++QG+ Sbjct: 30 GTVWAQSPSFPQLKPEEVSAIMKDFNEPGSLAPTGLHLGGTKYMVIQGEPGDVIRGKKGPGGVTIKKTNQALIIGIYGEPMTPGQCNMVVERIGDYLVEQGM 131
BLAST of CX300239 vs. ExPASy Swiss-Prot
Match: PROF1_PARJU (Profilin-1 OS=Parietaria judaica GN=PRO1 PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 4.776e-46 Identity = 84/102 (82.35%), Postives = 93/102 (91.18%), Query Frame = 1 Query: 1 GKVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 306 G VWAQS NFPQLKPEE+TGIMNDFNE G LAPTGL+LGGTKYMVIQGE GAVIRGKKG GG T+KKT A++IGIYDEPMTPGQCN++VERLGDYL++QGL Sbjct: 31 GSVWAQSANFPQLKPEEVTGIMNDFNEAGFLAPTGLFLGGTKYMVIQGESGAVIRGKKGSGGATLKKTGQAIVIGIYDEPMTPGQCNLVVERLGDYLLEQGL 132
BLAST of CX300239 vs. ExPASy Swiss-Prot
Match: PROF1_LILLO (Profilin-1 OS=Lilium longiflorum PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 4.776e-46 Identity = 85/102 (83.33%), Postives = 91/102 (89.22%), Query Frame = 1 Query: 1 GKVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 306 G +WAQS FPQ KPEEITGIMNDF EPG+LAPTGLYL G KYMVIQGEPGAVIRGKKG GGVTIKKT ALI GIY+EPMTPGQCNM+VER+GDYL+DQGL Sbjct: 30 GSIWAQSAGFPQFKPEEITGIMNDFAEPGSLAPTGLYLAGMKYMVIQGEPGAVIRGKKGSGGVTIKKTGQALIFGIYEEPMTPGQCNMVVERMGDYLVDQGL 131 The following BLAST results are available for this feature:
BLAST of CX300239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300239 ID=CX300239; Name=CX300239; organism=Citrus clementina; type=EST; length=541bpback to top |