CX300246

Overview
NameCX300246
Unique NameCX300246
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length506
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALF_SCHMA (Fructose-bisphosphate aldolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.443e-14
Identity = 40/84 (47.62%), Postives = 53/84 (63.10%), Query Frame = 2
Query:    2 ATLNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 247
            AT NLN +N+  GP PW ++FS+ RALQ + L TW G+ ENV AAQ+ LL  AKAN  A +GK+ G   +    K +FV  + Y
Sbjct:  280 ATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAAAVGKFEGNMGTTLGDKSLFVANHAY 363          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOB_BOVIN (Fructose-bisphosphate aldolase B OS=Bos taurus GN=ALDOB PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.443e-14
Identity = 42/85 (49.41%), Postives = 51/85 (60.00%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAK-KGMFVKGYTY 247
            ATLNLNA+N  P   PW +SFSY RALQ + L  WGG+ EN K  Q+  + RA ANS A  G+Y   G S  A  + +F   YTY
Sbjct:  280 ATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKTTQEAFMKRALANSQAAKGQYVHMGSSGSASTQSLFTASYTY 364          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALF1_LAMJA (Fructose-bisphosphate aldolase, muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.190e-14
Identity = 39/84 (46.43%), Postives = 54/84 (64.29%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 247
            A+++LNA+N+     PW ++FSY RALQ + LK WGG+ EN+KAAQD L+ RAK N  A  G+Y   G    A + +FV  + Y
Sbjct:  280 ASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYKPTGTGAAAGESLFVANHAY 363          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 5.442e-14
Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = 2
Query:   14 LNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 247
            LNAMN  P   PW ++FSYARALQ++ +K WGG+   V+A +   + RAK NSLAQLGKY    + ++  + ++V G TY
Sbjct:  294 LNAMNNCPLPRPWKLTFSYARALQSSAIKRWGGKESGVEAGRRAFMHRAKMNSLAQLGKY-NRADDDKDSQSLYVAGNTY 372          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOB_MOUSE (Fructose-bisphosphate aldolase B OS=Mus musculus GN=Aldob PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 5.442e-14
Identity = 41/85 (48.24%), Postives = 51/85 (60.00%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGES-EEAKKGMFVKGYTY 247
            ATLNLNA+N+ P   PW +SFSY RALQ + L  WGG+  N KA Q+  + RA AN  A  G+Y   G S   A + +F   YTY
Sbjct:  280 ATLNLNAINRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAMANCQAAQGQYVHTGSSGAAATQSLFTASYTY 364          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOB_RABIT (Fructose-bisphosphate aldolase B OS=Oryctolagus cuniculus GN=ALDOB PE=1 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 9.282e-14
Identity = 41/85 (48.24%), Postives = 50/85 (58.82%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAK-KGMFVKGYTY 247
            ATLNLNA+N  P   PW +SFSY RALQ + L  WGG+ EN KA Q+  + RA  N  A  G+Y   G S  A  + +F   YTY
Sbjct:  280 ATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRAVVNCQAAKGQYVHTGSSGAASTQSLFTASYTY 364          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOC_RAT (Fructose-bisphosphate aldolase C OS=Rattus norvegicus GN=Aldoc PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 2.701e-13
Identity = 36/84 (42.86%), Postives = 52/84 (61.90%), Query Frame = 2
Query:    2 ATLNLNAMNQG--PNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 247
            A+LNLNA+N+   P PW ++FSY RALQ + L  W G+ +N  AA +  + RA+ N LA  GKY G G+   A + ++V  + Y
Sbjct:  280 ASLNLNAINRCSLPRPWALTFSYGRALQASALSAWRGQRDNAGAATEEFIKRAEMNGLAAQGKYEGSGDGGAAAQSLYVANHAY 363          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 2.701e-13
Identity = 38/84 (45.24%), Postives = 50/84 (59.52%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 247
            A++NLNA+N  P   PW ++FSY RALQ + L  W G  EN KAA +  L RA+AN LA  GKY   G    A + ++V  + Y
Sbjct:  280 ASINLNAINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAATEEFLKRAEANGLAAQGKYVSSGMDGSAGQSLYVANHAY 363          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALF2_LAMJA (Fructose-bisphosphate aldolase, non-muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.527e-13
Identity = 40/85 (47.06%), Postives = 50/85 (58.82%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGES-EEAKKGMFVKGYTY 247
            A+LNLNA+NQ P   PW +SFSY RALQ + LK W G P N+ AA+     RA  N LA  GKY   G S   A + +F+  + Y
Sbjct:  280 ASLNLNAINQLPLERPWALSFSYGRALQASVLKAWAGAPANIPAAKKEFEKRAAINGLAAQGKYVPAGSSGSAASESLFIANHNY 364          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOB_RAT (Fructose-bisphosphate aldolase B OS=Rattus norvegicus GN=Aldob PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 6.016e-13
Identity = 40/85 (47.06%), Postives = 50/85 (58.82%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAK-KGMFVKGYTY 247
            ATLNLNA+ + P   PW +SFSY RALQ + L  WGG+  N KA Q+  + RA AN  A  G+Y   G S  A  + +F   YTY
Sbjct:  280 ATLNLNAIYRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAVANCQAAQGQYVHTGSSGAASTQSLFTASYTY 364          
The following BLAST results are available for this feature:
BLAST of CX300246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
ALF_SCHMA2.443e-1447.62Fructose-bisphosphate aldolase OS=Schistosoma mans... [more]
ALDOB_BOVIN2.443e-1449.41Fructose-bisphosphate aldolase B OS=Bos taurus GN=... [more]
ALF1_LAMJA3.190e-1446.43Fructose-bisphosphate aldolase, muscle type OS=Lam... [more]
ALF_TRYBB5.442e-1447.50Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]
ALDOB_MOUSE5.442e-1448.24Fructose-bisphosphate aldolase B OS=Mus musculus G... [more]
ALDOB_RABIT9.282e-1448.24Fructose-bisphosphate aldolase B OS=Oryctolagus cu... [more]
ALDOC_RAT2.701e-1342.86Fructose-bisphosphate aldolase C OS=Rattus norvegi... [more]
ALDOC_CARAU2.701e-1345.24Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALF2_LAMJA3.527e-1347.06Fructose-bisphosphate aldolase, non-muscle type OS... [more]
ALDOB_RAT6.016e-1347.06Fructose-bisphosphate aldolase B OS=Rattus norvegi... [more]

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Properties
Property NameValue
Genbank descriptionC07007H04SK SaltLeaf1 Citrus clementina cDNA clone C07007H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300246 ID=CX300246; Name=CX300246; organism=Citrus clementina; type=EST; length=506bp
GGCAACCCTCAACTTGAACGCCATGAACCAAGGTCCCAACCCATGGCACG
TATCTTTCTCTTATGCCAGAGCTCTCCAAAACACCTGCCTGAAGACATGG
GGTGGCAGGCCAGAGAATGTCAAGGCAGCTCAGGATACTCTGCTCACCCG
TGCCAAGGCCAACTCACTTGCTCAGCTCGGCAAGTACACTGGCGAGGGAG
AATCAGAGGAGGCCAAGAAAGGAATGTTCGTCAAGGGATACACCTACTAA
ATTTGTTAGCACGAAGATCATAAGAATGGTGAAGAAATTTGAAATGAGTA
GTCATCTCAAATGTGTTAATGCTTTATAGCCGTGCTTTGGAGACTATTTT
TGTTCATGATTACATGTACTTTTAGCAACTTAATAAACTTCTTGCCAATG
AGATGAGTTAGTGTGTATTTATGATGAGATTAAGTTCTCTGTACTTTTAT
GTGCATCGTATCTTATACTGCTTTAGTTTACAGTCCAAAAAAAAAAAAAA
AAAAAA
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