CX300251

Overview
NameCX300251
Unique NameCX300251
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length578
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300251 vs. ExPASy Swiss-Prot
Match: ALF_DROME (Fructose-bisphosphate aldolase OS=Drosophila melanogaster GN=Ald PE=1 SV=5)

HSP 1 Score: 121.324 bits (303), Expect = 3.355e-27
Identity = 65/135 (48.15%), Postives = 87/135 (64.44%), Query Frame = 1
Query:    1 LKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIKYLSGGQSEVEATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKRGMFVKGYTY 399
            LKP+MVT G   K K TP+++A  T++ L R +P AV G+ +LSGGQSE EAT+NL+A+N  P   PW ++FSY RALQ + L+ W G+ EN+ A Q+ LL RAKAN  A  GKY   G +      +FV  + Y
Sbjct:  229 LKPNMVTAGQSAK-KNTPEEIALATVQALRRTVPAAVTGVTFLSGGQSEEEATVNLSAINNVPLIRPWALTFSYGRALQASVLRAWAGKKENIAAGQNELLKRAKANGDAAQGKYVA-GSAGAGSGSLFVANHAY 361          
BLAST of CX300251 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.382e-27
Identity = 65/136 (47.79%), Postives = 89/136 (65.44%), Query Frame = 1
Query:    1 LKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIKYLSGGQSEVEATLNLNAMN--QGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAK-RGMFVKGYTY 399
            LKP+MVTPG  C  K + ++VA  T+  L R +PPAV G+ +LSGGQSE EA++NL+A+N  +   PW ++FS+ RALQ + LKTW G+ EN  AA +  + RA+ NSLA  GKYT  G+S  A     ++  Y Y
Sbjct:  229 LKPNMVTPGHGCPTKYSAEEVAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLSAINNCRLVKPWALTFSFGRALQASALKTWRGQRENEAAATEEFIKRAEINSLASQGKYTVCGDSSGATGLSHYLSSYAY 364          
BLAST of CX300251 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFT (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1845 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.250e-23
Identity = 57/117 (48.72%), Postives = 75/117 (64.10%), Query Frame = 1
Query:    1 LKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIKYLSGGQSEVEATLNLNAMNQ-GPNPWHVSFSYARALQNTCLKTWG-GRPENVKAAQDTLLTRAKANSLAQLGKYTG 345
            LK SMV PG +C+E+A+  +VAE T+  L   +P  +PGI +LSGGQ++ ++T +LNAMNQ  P PW +SFSY RA+Q   LK W      N   AQ  +  RAK N LA LGK+ G
Sbjct:  218 LKASMVIPGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQFDPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CX300251 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFA (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa GN=XF_0826 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.250e-23
Identity = 57/117 (48.72%), Postives = 75/117 (64.10%), Query Frame = 1
Query:    1 LKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIKYLSGGQSEVEATLNLNAMNQ-GPNPWHVSFSYARALQNTCLKTWG-GRPENVKAAQDTLLTRAKANSLAQLGKYTG 345
            LK SMV PG +C+E+A+  +VAE T+  L   +P  +PGI +LSGGQ++ ++T +LNAMNQ  P PW +SFSY RA+Q   LK W      N   AQ  +  RAK N LA LGK+ G
Sbjct:  218 LKASMVIPGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQLDPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CX300251 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.905e-22
Identity = 51/91 (56.04%), Postives = 66/91 (72.53%), Query Frame = 1
Query:    1 LKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIKYLSGGQSEVEATLNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGRPE 267
            LKP+MVT G  C +K TP+ +A  T+  L+R +P AV GI +LSGGQSE +AT+NLNA+NQ  G  PW ++FSY RALQ + LK WGG+ E
Sbjct:   10 LKPNMVTAGQGCPKKYTPEDIARATVTALNRTVPAAVAGITFLSGGQSEEDATINLNAINQFPGRKPWPLTFSYGRALQASVLKAWGGKDE 100          
BLAST of CX300251 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.004e-21
Identity = 54/117 (46.15%), Postives = 73/117 (62.39%), Query Frame = 1
Query:    1 LKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIKYLSGGQSEVEATLNLNAMNQ-GPNPWHVSFSYARALQNTCLKTWG-GRPENVKAAQDTLLTRAKANSLAQLGKYTG 345
            LK SMV  G  C+E+A+ ++VAE T+  L   +P  +PGI +LSGGQ++ ++T +LN M+Q G  PW +SFSY RA+Q   LK W      N   AQ  +  RAK N LA LGK+ G
Sbjct:  218 LKASMVISGKSCEEQASIEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQLGNLPWPLSFSYGRAMQQAALKLWAKDMTGNFAKAQQVIYERAKENGLAALGKWKG 334          
BLAST of CX300251 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.365e-20
Identity = 54/117 (46.15%), Postives = 73/117 (62.39%), Query Frame = 1
Query:    1 LKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIKYLSGGQSEVEATLNLNAMNQ-GPNPWHVSFSYARALQNTCLKTWG-GRPENVKAAQDTLLTRAKANSLAQLGKYTG 345
            LK SMV  G  C+E+A+ ++VAE T+  L   +P  +PGI +LSGGQ++ ++T +LN M+Q G  PW +SFSY RA+Q   LK W      N   AQ  +  RAK N LA LGK+ G
Sbjct:  218 LKASMVISGKGCEEQASVEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQLGNLPWPLSFSYGRAMQQAALKLWSKDMTGNYAKAQQIIYERAKENGLAALGKWKG 334          
BLAST of CX300251 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.322e-15
Identity = 46/101 (45.54%), Postives = 62/101 (61.39%), Query Frame = 1
Query:    1 LKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIKYLSGGQSEVEATLNLNAMN--QGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLL 297
            +K S VT G    EK TP++VA +TL+ L   IP  +PGI +LSGG    +A   LNA+N  +G   W +SFS+ARAL +  L+TW G   N++ AQ  LL
Sbjct:  220 IKASYVTSGQLSNEKYTPKKVATFTLRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAINMERGCRTWSLSFSFARALTDGVLETWRGDDSNIEEAQKILL 320          
The following BLAST results are available for this feature:
BLAST of CX300251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF_DROME3.355e-2748.15Fructose-bisphosphate aldolase OS=Drosophila melan... [more]
ALDCA_DANRE4.382e-2747.79Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]
ALF1_XYLFT2.250e-2348.72Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XYLFA2.250e-2348.72Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF_LYMST1.905e-2256.04Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]
ALF1_XANAC8.004e-2146.15Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANCP1.365e-2046.15Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF_ENCCU1.322e-1545.54Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionC07007H09SK SaltLeaf1 Citrus clementina cDNA clone C07007H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300251 ID=CX300251; Name=CX300251; organism=Citrus clementina; type=EST; length=578bp
CTGAAGCCTAGCATGGTCACTCCTGGTGCTGAATGCAAGGAGAAGGCCAC
ACCACAACAGGTTGCTGAGTACACACTCAAGCTCCTTCACAGGAGAATAC
CTCCAGCTGTCCCCGGAATCAAGTACTTGTCTGGTGGGCAATCTGAGGTT
GAGGCAACCCTCAACTTGAACGCCATGAACCAAGGTCCCAACCCATGGCA
CGTATCTTTCTCTTATGCCAGAGCTCTCCAAAACACCTGCCTGAAGACAT
GGGGTGGCAGGCCAGAGAATGTCAAGGCAGCTCAGGATACTCTGCTCACC
CGTGCCAAGGCCAACTCACTTGCTCAGCTCGGCAAGTACACTGGCGAGGG
AGAATCAGAGGAGGCCAAGAGAGGAATGTTCGTCAAGGGATACACCTACT
AAATTTGTTAGCACGAAGATCATAAGAATGGTGAACAAATTTGAAATGAG
TAGTCATCTCAAATGTGTTAATGCTTTATAGCCGTGCTTTGGAGACTATT
TTTGTTCATGATTACATGTACTTTTAGCAACTTAATAAACTTCTTGCCAA
TGACATGAAAAAAAAAAAAAAAAAAAAA
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