CX300260
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300260 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.596e-21 Identity = 57/116 (49.14%), Postives = 74/116 (63.79%), Query Frame = 3 Query: 9 EAVWFKTGALLLDGHPLNYFGLN--IPLNLVFAVIA-EIVLVSGAEYYTITHGL--HLEDKLHPGGPFDPLGLAKDPDQFALLKV*EIKNGTLAMFAMLELFLQAYVTGEGPVENL 341 EAVWFK GA + L+Y G I + A+ A +++L+ E Y + G + D ++PGG FDPLGLA DPD FA +KV EIKNG LAMF+M F+QA VTG+GP+ENL Sbjct: 140 EAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 255
BLAST of CX300260 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.596e-21 Identity = 59/116 (50.86%), Postives = 75/116 (64.66%), Query Frame = 3 Query: 9 EAVWFKTGALLLDGHPLNYFGLN--IPLNLVFAV-IAEIVLVSGAEYYTITHGLHLE--DKLHPGGPFDPLGLAKDPDQFALLKV*EIKNGTLAMFAMLELFLQAYVTGEGPVENL 341 EAVWFK G+ + L+Y G I + A+ A++VL+ E Y + G E DK++PGG FDPLGLA DP+ FA LKV EIKNG LAMF+M F+QA VTG+GP+ENL Sbjct: 127 EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 242
BLAST of CX300260 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.596e-21 Identity = 58/117 (49.57%), Postives = 76/117 (64.96%), Query Frame = 3 Query: 9 EAVWFKTGALLLDGHPLNYFGLNIPLNLVFAVIA----EIVLVSGAEYYTITHGL--HLEDKLHPGGPFDPLGLAKDPDQFALLKV*EIKNGTLAMFAMLELFLQAYVTGEGPVENL 341 EAVWFK G+ + L+Y G N L +++A ++VL+ E Y + G + D L+PGG FDPLGLA+DP+ FA LKV EIKNG LAMF+M F+QA VTG+GP+ENL Sbjct: 129 EAVWFKAGSQIFSEGGLDYLG-NPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 244
BLAST of CX300260 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.596e-21 Identity = 56/117 (47.86%), Postives = 76/117 (64.96%), Query Frame = 3 Query: 9 EAVWFKTGALLLDGHPLNYFGLNIPLNLVFAVIA----EIVLVSGAEYYTITHGL--HLEDKLHPGGPFDPLGLAKDPDQFALLKV*EIKNGTLAMFAMLELFLQAYVTGEGPVENL 341 EAVWFK G+ + L+Y G N L +++A +++L+ E Y + G +ED ++PGG FDPLGLA DP+ FA LKV E+KNG LAMF+M F+QA VTG+GP+ENL Sbjct: 127 EAVWFKAGSQIFAEGGLDYLG-NPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 242
BLAST of CX300260 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.596e-21 Identity = 58/117 (49.57%), Postives = 76/117 (64.96%), Query Frame = 3 Query: 9 EAVWFKTGALLLDGHPLNYFGLNIPLNLVFAVIA----EIVLVSGAEYYTITHGL--HLEDKLHPGGPFDPLGLAKDPDQFALLKV*EIKNGTLAMFAMLELFLQAYVTGEGPVENL 341 EAVWFK G+ + L+Y G N L +++A ++VL+ E Y + G + D L+PGG FDPLGLA+DP+ FA LKV EIKNG LAMF+M F+QA VTG+GP+ENL Sbjct: 128 EAVWFKAGSQIFSEGGLDYLG-NPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 243
BLAST of CX300260 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.084e-21 Identity = 59/117 (50.43%), Postives = 75/117 (64.10%), Query Frame = 3 Query: 9 EAVWFKTGALLLDGHPLNYFGLNIPLNLVFAVIA----EIVLVSGAEYYTITHGL--HLEDKLHPGGPFDPLGLAKDPDQFALLKV*EIKNGTLAMFAMLELFLQAYVTGEGPVENL 341 EAVWFK G+ + L+Y G N L +++A ++VL+ E Y I G + D L+PGG FDPLGLA DP+ FA LKV EIKNG LAMF+M F+QA VTG+GP+ENL Sbjct: 129 EAVWFKAGSQIFSEGGLDYLG-NPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 244
BLAST of CX300260 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.084e-21 Identity = 57/117 (48.72%), Postives = 76/117 (64.96%), Query Frame = 3 Query: 9 EAVWFKTGALLLDGHPLNYFGLNIPLNLVFAVIA----EIVLVSGAEYYTITHGL--HLEDKLHPGGPFDPLGLAKDPDQFALLKV*EIKNGTLAMFAMLELFLQAYVTGEGPVENL 341 EAVWFK G+ + L+Y G N L +++A +++L+ E Y + G + D L+PGG FDPLGLA+DP+ FA LKV EIKNG LAMF+M F+QA VTG+GP+ENL Sbjct: 127 EAVWFKAGSQIFSEGGLDYLG-NPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 242
BLAST of CX300260 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 2.084e-21 Identity = 59/116 (50.86%), Postives = 74/116 (63.79%), Query Frame = 3 Query: 9 EAVWFKTGALLLDGHPLNYFGLN--IPLNLVFAVIA-EIVLVSGAEYYTITHGL--HLEDKLHPGGPFDPLGLAKDPDQFALLKV*EIKNGTLAMFAMLELFLQAYVTGEGPVENL 341 EAVWFK G+ + L+Y G I + A+ A ++VL+ E Y I G + D L+PGG FDPLGLA DP+ FA LKV EIKNG LAMF+M F+QA VTG+GP+ENL Sbjct: 123 EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 238
BLAST of CX300260 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 2.084e-21 Identity = 59/116 (50.86%), Postives = 74/116 (63.79%), Query Frame = 3 Query: 9 EAVWFKTGALLLDGHPLNYFGLN--IPLNLVFAVIA-EIVLVSGAEYYTITHGL--HLEDKLHPGGPFDPLGLAKDPDQFALLKV*EIKNGTLAMFAMLELFLQAYVTGEGPVENL 341 EAVWFK G+ + L+Y G I + A+ A ++VL+ E Y I G + D L+PGG FDPLGLA DP+ FA LKV EIKNG LAMF+M F+QA VTG+GP+ENL Sbjct: 127 EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 242
BLAST of CX300260 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.722e-21 Identity = 58/117 (49.57%), Postives = 75/117 (64.10%), Query Frame = 3 Query: 9 EAVWFKTGALLLDGHPLNYFGLNIPLNLVFAVIA----EIVLVSGAEYYTITHGL--HLEDKLHPGGPFDPLGLAKDPDQFALLKV*EIKNGTLAMFAMLELFLQAYVTGEGPVENL 341 EAVWFK G+ + L+Y G N L +++A +++L+ E Y I G + D L+PGG FDPLGLA DP+ FA LKV EIKNG LAMF+M F+QA VTG+GP+ENL Sbjct: 129 EAVWFKAGSQIFSEGGLDYLG-NPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 244 The following BLAST results are available for this feature:
BLAST of CX300260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300260 ID=CX300260; Name=CX300260; organism=Citrus clementina; type=EST; length=341bpback to top |