CX300260
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300260 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.722e-21 Identity = 59/116 (50.86%), Postives = 75/116 (64.66%), Query Frame = 3 Query: 9 EAVWFKTGALLLDGHPLNYFGLN--IPLNLVFAVIA-EIVLVSGAEYYTITHGLHLE--DKLHPGGPFDPLGLAKDPDQFALLKV*EIKNGTLAMFAMLELFLQAYVTGEGPVENL 341 EAVWFK G+ + L+Y G I + A+ A ++VL+ E Y + G E DK++PGG FDPLGLA DP+ FA LKV EIKNG LAMF+M F+QA VTG+GP+ENL Sbjct: 99 EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 214
BLAST of CX300260 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.722e-21 Identity = 58/117 (49.57%), Postives = 75/117 (64.10%), Query Frame = 3 Query: 9 EAVWFKTGALLLDGHPLNYFGLNIPLNLVFAVIA----EIVLVSGAEYYTITHGL--HLEDKLHPGGPFDPLGLAKDPDQFALLKV*EIKNGTLAMFAMLELFLQAYVTGEGPVENL 341 EAVWFK G+ + L+Y G N L +++A ++VL+ E Y + G + D L+PGG FDPLGLA DP+ FA LKV EIKNG LAMF+M F+QA VTG+GP+ENL Sbjct: 129 EAVWFKAGSQIFSEGGLDYLG-NPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 244
BLAST of CX300260 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.556e-21 Identity = 61/119 (51.26%), Postives = 77/119 (64.71%), Query Frame = 3 Query: 9 EAVWFKTGALLLDGHPLNYFGLNIPLNLVFA--VIA----EIVLVSGAEYYTITHGLHLE--DKLHPGGPFDPLGLAKDPDQFALLKV*EIKNGTLAMFAMLELFLQAYVTGEGPVENL 341 EAVWFK G+ + L+Y G NLV A ++A ++VL+ E Y + G E DK++PGG FDPLGLA DP+ FA LKV EIKNG LAMF+M F+QA VTG+GP+ENL Sbjct: 127 EAVWFKAGSQIFSEGGLDYLGNP---NLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 242
BLAST of CX300260 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.556e-21 Identity = 59/117 (50.43%), Postives = 75/117 (64.10%), Query Frame = 3 Query: 9 EAVWFKTGALLLDGHPLNYFGLNIPLNLVFAVIA----EIVLVSGAEYYTITHGLHLE--DKLHPGGPFDPLGLAKDPDQFALLKV*EIKNGTLAMFAMLELFLQAYVTGEGPVENL 341 EAVWFK G+ + L+Y G N L +++A ++VL+ E Y + G E D L+PGG FDPLGLA DP+ FA LKV EIKNG LAMF+M F+QA VTG+GP+ENL Sbjct: 128 EAVWFKAGSQIFSEGGLDYLG-NPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 243
BLAST of CX300260 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.556e-21 Identity = 60/116 (51.72%), Postives = 75/116 (64.66%), Query Frame = 3 Query: 9 EAVWFKTGALLLDGHPLNYFGLN--IPLNLVFAVIA-EIVLVSGAEYYTITHGLHLE--DKLHPGGPFDPLGLAKDPDQFALLKV*EIKNGTLAMFAMLELFLQAYVTGEGPVENL 341 EAVWFK G+ + L+Y G I + AV A ++VL+ E Y + G E DK++PGG FDPLGLA DP+ FA LKV EIKNG LAMF+M F+QA VTG+GP+ENL Sbjct: 127 EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 242
BLAST of CX300260 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.556e-21 Identity = 57/118 (48.31%), Postives = 75/118 (63.56%), Query Frame = 3 Query: 9 EAVWFKTGALLLDGHPLNYFGLNIPLNLVFAVIA----EIVLVSGAEYYTITHGLHL---EDKLHPGGPFDPLGLAKDPDQFALLKV*EIKNGTLAMFAMLELFLQAYVTGEGPVENL 341 EAVWFK G+ + L+Y G N L +++A +++L+ E Y + L ED L+PGG FDPLGLA DP+ FA LKV E+KNG LAMF+M F+QA VTG+GP+ENL Sbjct: 128 EAVWFKAGSQIFSDGGLDYLG-NPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 244
BLAST of CX300260 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.556e-21 Identity = 58/116 (50.00%), Postives = 74/116 (63.79%), Query Frame = 3 Query: 9 EAVWFKTGALLLDGHPLNYFGLN--IPLNLVFAVIA-EIVLVSGAEYYTITHGL--HLEDKLHPGGPFDPLGLAKDPDQFALLKV*EIKNGTLAMFAMLELFLQAYVTGEGPVENL 341 EAVWFK G+ + L+Y G I + A+ A ++VL+ E Y I G + D L+PGG FDPLGLA DP+ FA LKV E+KNG LAMF+M F+QA VTG+GP+ENL Sbjct: 124 EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 239
BLAST of CX300260 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.556e-21 Identity = 57/118 (48.31%), Postives = 75/118 (63.56%), Query Frame = 3 Query: 9 EAVWFKTGALLLDGHPLNYFGLNIPLNLVFAVIA----EIVLVSGAEYYTITHGLHL---EDKLHPGGPFDPLGLAKDPDQFALLKV*EIKNGTLAMFAMLELFLQAYVTGEGPVENL 341 EAVWFK G+ + L+Y G N L +++A +++L+ E Y + L ED L+PGG FDPLGLA DP+ FA LKV E+KNG LAMF+M F+QA VTG+GP+ENL Sbjct: 128 EAVWFKAGSQIFSDGGLDYLG-NPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 244
BLAST of CX300260 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.644e-21 Identity = 57/117 (48.72%), Postives = 75/117 (64.10%), Query Frame = 3 Query: 9 EAVWFKTGALLLDGHPLNYFGLNIPLNLVFAVIA----EIVLVSGAEYYTITHGL--HLEDKLHPGGPFDPLGLAKDPDQFALLKV*EIKNGTLAMFAMLELFLQAYVTGEGPVENL 341 EAVWFK G+ + L+Y G N L +++A +++L+ E Y I G + D L+PGG FDPLGLA DP+ FA LKV E+KNG LAMF+M F+QA VTG+GP+ENL Sbjct: 130 EAVWFKAGSQIFSEGGLDYLG-NPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 245
BLAST of CX300260 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.644e-21 Identity = 57/117 (48.72%), Postives = 75/117 (64.10%), Query Frame = 3 Query: 9 EAVWFKTGALLLDGHPLNYFGLNIPLNLVFAVIA----EIVLVSGAEYYTITHGL--HLEDKLHPGGPFDPLGLAKDPDQFALLKV*EIKNGTLAMFAMLELFLQAYVTGEGPVENL 341 EAVWFK G+ + L+Y G N L +++A +++L+ E Y I G + D L+PGG FDPLGLA DP+ FA LKV E+KNG LAMF+M F+QA VTG+GP+ENL Sbjct: 131 EAVWFKAGSQIFSEGGLDYLG-NPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 246 The following BLAST results are available for this feature:
BLAST of CX300260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300260 ID=CX300260; Name=CX300260; organism=Citrus clementina; type=EST; length=341bpback to top |