CX300332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300332 vs. ExPASy Swiss-Prot
Match: COBW_PSEAE (Protein cobW OS=Pseudomonas aeruginosa GN=cobW PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.102e-17 Identity = 49/116 (42.24%), Postives = 73/116 (62.93%), Query Frame = 1 Query: 1 ILNGKHGKRIAVILNEFGEEIGVERAMINEGEGGALIEEW----VELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPLASVL-WLDDQLESAVRLDSIITVVDA 333 +L+ G+RIAVI+NEFGE +G++ ++ + G EE ELANGC+CCTV+ + +LV R+ LD IL+ET+GLA P PL W ++ +A +D++ITVVD+ Sbjct: 52 MLDNAEGRRIAVIVNEFGE-LGIDGEILKQCSIGCSEEEAQGRVFELANGCLCCTVQEEFFPVMRELVARRGDLDQILIETSGLALPKPLVQAFQW--PEIRNACTVDAVITVVDS 164
BLAST of CX300332 vs. ExPASy Swiss-Prot
Match: Y4527_DICDI (COBW domain-containing protein DDB_G0274527 OS=Dictyostelium discoideum GN=DDB_G0274527 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.906e-14 Identity = 43/130 (33.08%), Postives = 75/130 (57.69%), Query Frame = 1 Query: 1 ILNGKHGKRIAVILNEFGEEIGVERAMINEGEGGAL--------IEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPLASVLWLD-----DQLESAVRLDSIITVVDAKNLLFQ 351 ILN HG +IAVI+N+ E + ++ +I E E +E VE++NGCICCT++ L+ + +L + K R D++++E++G++ P P+A + + L+ +LD+++TVVD L Q Sbjct: 63 ILNSNHGLKIAVIVNDMSE-VNIDSKLILENEFKITRTKATEKQVEAVVEMSNGCICCTMREDLLVEVTKLAKEK-RFDYLIIESSGISEPLPIAETFTFEIDGSIENLKDYTKLDTMVTVVDCSTWLEQ 190
BLAST of CX300332 vs. ExPASy Swiss-Prot
Match: YCIC_BACSU (Putative metal chaperone yciC OS=Bacillus subtilis GN=yciC PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.241e-14 Identity = 43/118 (36.44%), Postives = 77/118 (65.25%), Query Frame = 1 Query: 1 ILNGKHGKRIAVILNEFGEEIGVERAMINEGEGGA--LIEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPLASVL-WLDDQ----LESAVRLDSIITVVDA 333 IL + G +IAVI+N+ E + ++ ++ + EGG E+ VE++NGCICCT++ L+ +E+L + R D+I++E+TG++ P P+A ++D++ L +LD+++TVVDA Sbjct: 24 ILQNREGLKIAVIVNDMSE-VNIDAGLVKQ-EGGLSRTDEKLVEMSNGCICCTLREDLLIEVEKLA-KDGRFDYIVIESTGISEPIPVAQTFSYIDEEMGIDLTKFCQLDTMVTVVDA 138
BLAST of CX300332 vs. ExPASy Swiss-Prot
Match: P47K_PSECL (47 kDa protein OS=Pseudomonas chlororaphis PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.107e-13 Identity = 42/119 (35.29%), Postives = 71/119 (59.66%), Query Frame = 1 Query: 1 ILNGKHGKRIAVILNEFGE-----EIGVERAMINEGEGGALIEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPLASVL-WLDDQ---LESAVRLDSIITVVD 330 IL + G R+AVI+N+ E E ++ G +E +E++NGCICCT++ L++ + L R++R D++L+E+TG++ P P+A +LD + L RLD+++TVVD Sbjct: 30 ILRNRQGLRVAVIVNDMSEVNLDAESVQRDVSLHRGR-----DELIEMSNGCICCTLRADLLEQISDLA-RQQRFDYLLIESTGISEPMPVAETFAFLDTEGFSLSELARLDTLVTVVD 142
BLAST of CX300332 vs. ExPASy Swiss-Prot
Match: YJIA_ECOLI (Uncharacterized GTP-binding protein yjiA OS=Escherichia coli (strain K12) GN=yjiA PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 6.778e-12 Identity = 43/115 (37.39%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 1 ILNGKHGKRIAVILNEFGEEIGVERAMINEGEGGALIEEWVELANGCICCTVKHSLVQALEQLVQRKER----LDHILLETTGLANPAPLASVLWLDDQLESAVRLDSIITVVDA 333 ILN +HG +IAVI NEFGE + V+ +I G+ I+ L NGCICC+ + L AL L+ ++ D +++E TG+A+P P+ + + L LD +I +VDA Sbjct: 24 ILNEQHGYKIAVIENEFGE-VSVDDQLI--GDRATQIKT---LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQRYLLDGVIALVDA 132 The following BLAST results are available for this feature:
BLAST of CX300332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300332 ID=CX300332; Name=CX300332; organism=Citrus clementina; type=EST; length=362bpback to top |