CX300339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300339 vs. ExPASy Swiss-Prot
Match: PLAS_SAMNI (Plastocyanin OS=Sambucus nigra GN=PETE PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.498e-14 Identity = 34/41 (82.93%), Postives = 39/41 (95.12%), Query Frame = 2 Query: 236 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVF 358 +E+LLGG+DGSLAF+PS+FSV SGEKI FKNNAGFPHNVVF Sbjct: 1 VEILLGGEDGSLAFIPSNFSVPSGEKITFKNNAGFPHNVVF 41
BLAST of CX300339 vs. ExPASy Swiss-Prot
Match: PLAS_SOLTU (Plastocyanin OS=Solanum tuberosum GN=PETE PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.263e-14 Identity = 34/41 (82.93%), Postives = 39/41 (95.12%), Query Frame = 2 Query: 236 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVF 358 ++VLLGGDDGSLAF+P +FSVS+GEKI FKNNAGFPHNVVF Sbjct: 1 LDVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVF 41
BLAST of CX300339 vs. ExPASy Swiss-Prot
Match: PLAS_CAPBU (Plastocyanin OS=Capsella bursa-pastoris GN=PETE PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.565e-14 Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 2 Query: 236 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVF 358 IEVLLGG DGSLAFVP+ FS++ GEKIVFKNNAGFPHNVVF Sbjct: 1 IEVLLGGGDGSLAFVPNDFSIAKGEKIVFKNNAGFPHNVVF 41
BLAST of CX300339 vs. ExPASy Swiss-Prot
Match: PLAS_FRIAG (Plastocyanin, chloroplastic OS=Fritillaria agrestis GN=PETE PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.269e-14 Identity = 43/96 (44.79%), Postives = 55/96 (57.29%), Query Frame = 2 Query: 74 GLKAGATPARVVGSTMKASASAVPKLSIKATLKD-VGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVF 358 GLKAG P S + + S+KA+ K+ +G +EVLLGG DGSLAFVPS+ V++GE +VFKNNAGFPHNV+F Sbjct: 16 GLKAGRAPTTPSTSIKPPTPMS---FSVKASFKEAIGTALVATAAGAVLASNALAVEVLLGGSDGSLAFVPSNIEVAAGETVVFKNNAGFPHNVLF 108
BLAST of CX300339 vs. ExPASy Swiss-Prot
Match: PLAS_RUMOB (Plastocyanin OS=Rumex obtusifolius GN=PETE PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.493e-14 Identity = 33/41 (80.49%), Postives = 39/41 (95.12%), Query Frame = 2 Query: 236 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVF 358 IE+ LGGDDG+LAFVP SF+V++GEKIVFKNNAGFPHN+VF Sbjct: 1 IEIKLGGDDGALAFVPGSFTVAAGEKIVFKNNAGFPHNIVF 41
BLAST of CX300339 vs. ExPASy Swiss-Prot
Match: PLAS2_TOBAC (Plastocyanin B'/B'' OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.493e-14 Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 2 Query: 236 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVF 358 IEVLLG DDG LAFVP +FSVS+GEKI FKNNAGFPHNVVF Sbjct: 1 IEVLLGSDDGGLAFVPGNFSVSAGEKITFKNNAGFPHNVVF 41
BLAST of CX300339 vs. ExPASy Swiss-Prot
Match: PLAS1_TOBAC (Plastocyanin A'/A'' OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.493e-14 Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 2 Query: 236 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVF 358 IEVLLG DDG LAFVP +FSVS+GEKI FKNNAGFPHNVVF Sbjct: 1 IEVLLGSDDGGLAFVPGNFSVSAGEKITFKNNAGFPHNVVF 41
BLAST of CX300339 vs. ExPASy Swiss-Prot
Match: PLAS_SOLCR (Plastocyanin OS=Solanum crispum GN=PETE PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.240e-13 Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 2 Query: 236 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVF 358 IEVLLG DDG LAFVP +FS+S+GEKI FKNNAGFPHNVVF Sbjct: 1 IEVLLGSDDGGLAFVPGNFSISAGEKITFKNNAGFPHNVVF 41
BLAST of CX300339 vs. ExPASy Swiss-Prot
Match: PLAS_PHAVU (Plastocyanin OS=Phaseolus vulgaris GN=PETE PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.762e-13 Identity = 35/41 (85.37%), Postives = 36/41 (87.80%), Query Frame = 2 Query: 236 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVF 358 +EVLLG DGSL FVPS FSV SGEKIVFKNNAGFPHNVVF Sbjct: 1 LEVLLGSGDGSLVFVPSEFSVPSGEKIVFKNNAGFPHNVVF 41
BLAST of CX300339 vs. ExPASy Swiss-Prot
Match: PLAS_MERPE (Plastocyanin OS=Mercurialis perennis GN=PETE PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.711e-13 Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 2 Query: 236 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVF 358 ++VLLG DDG LAFVP++FSV SGEKI FKNNAGFPHNVVF Sbjct: 1 LDVLLGSDDGELAFVPNNFSVPSGEKITFKNNAGFPHNVVF 41 The following BLAST results are available for this feature:
BLAST of CX300339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300339 ID=CX300339; Name=CX300339; organism=Citrus clementina; type=EST; length=359bpback to top |