CX300349
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP23_MAIZE (Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.186e-29 Identity = 56/107 (52.34%), Postives = 78/107 (72.90%), Query Frame = 1 Query: 49 TLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKP 369 T P+G + A +E ++TF +MFV VATD+RA+GELAGLAVGS V + +FAGP++G SMNPAR+L PA+ S+ + GLWIY + P +G +GAWVY +R+ + P Sbjct: 163 TTPSGPHWHALAIEIVVTFNMMFVTCAVATDSRAVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVFTGLWIYFLGPVVGTLSGAWVYTYIRFEEAP 269
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP21_MAIZE (Aquaporin NIP2-1 OS=Zea mays GN=NIP2-1 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 5.468e-29 Identity = 58/107 (54.21%), Postives = 76/107 (71.03%), Query Frame = 1 Query: 49 TLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKP 369 T P G + + V+E I+TF +MFV VATD RA+GELAGLAVGS V + +FAG ++G SMNPAR+LGPA+ S+ Y GLWIY + P LG +GAW Y +R+ + P Sbjct: 155 TTPTGPHWHSLVIEIIVTFNMMFVTLAVATDTRAVGELAGLAVGSAVCITSIFAGAVSGGSMNPARTLGPALASNLYTGLWIYFLGPVLGTLSGAWTYTYIRFEEAP 261
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP33_ORYSJ (Aquaporin NIP3-3 OS=Oryza sativa subsp. japonica GN=NIP3-3 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.658e-26 Identity = 52/102 (50.98%), Postives = 77/102 (75.49%), Query Frame = 1 Query: 49 TLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVR 354 T+P ++AF +EFIITF+L+F+I+ +ATD A+ EL +AVG+TV++N++ AGP TGASMNPAR++G AI + +Y +W+Y+VA PLGA AG Y ++ Sbjct: 176 TVPNVGTVEAFFVEFIITFFLLFIITALATDPNAVKELIAVAVGATVMMNILVAGPSTGASMNPARTIGAAIATGRYTQIWVYLVATPLGAIAGTGAYVAIK 277
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP32_ORYSJ (Aquaporin NIP3-2 OS=Oryza sativa subsp. japonica GN=NIP3-2 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.260e-25 Identity = 51/102 (50.00%), Postives = 75/102 (73.53%), Query Frame = 1 Query: 49 TLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVR 354 T+P ++AF +EF+ TF L+F+I+ +ATD A+ EL +AVG+T+++N + AGP TGASMNPAR+LGPAI + +Y +W+Y+VA PLGA AG Y ++ Sbjct: 203 TVPKVGTVEAFFLEFVTTFVLLFIITALATDPNAVKELIAVAVGATIMMNALVAGPSTGASMNPARTLGPAIATGRYTQIWVYLVATPLGAVAGEGFYFAIK 304
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP41_ORYSJ (Aquaporin NIP4-1 OS=Oryza sativa subsp. japonica GN=NIP4-1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.143e-18 Identity = 51/124 (41.13%), Postives = 75/124 (60.48%), Query Frame = 1 Query: 4 TLRLLFQEKQDQFAGTLPA---GSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDK 366 ++ + + + D F GT P G+ + F+MEF+ + LM VI+ VATD A + G+A+G+ V + GP++G SMNPAR+LGPAIV +Y G+WIY+VAP G GA VR + + Sbjct: 148 SVNAVMRPRHDHFYGTAPVVVHGTRLP-FLMEFLASAVLMIVIATVATDGTAGKTVGGIAIGAAVGGLGLVIGPVSGGSMNPARTLGPAIVLGRYDGVWIYVVAPVAGMLVGALCNRAVRLSHR 270
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP71_ARATH (Probable aquaporin NIP7-1 OS=Arabidopsis thaliana GN=NIP7-1 PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 7.407e-18 Identity = 44/108 (40.74%), Postives = 66/108 (61.11%), Query Frame = 1 Query: 49 TLPAGSNIQAFVMEFIITFYLMFVISGV-ATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKP 369 T PA S + AF +E I T ++F+ S + ++ +G L G +G+ + L V+ GPI+G SMNPARSLGPA+V+ ++ LWIY+ AP +GA G Y + +P Sbjct: 154 TKPALSCVSAFFVELIATSIVVFLASALHCGPHQNLGNLTGFVIGTVISLGVLITGPISGGSMNPARSLGPAVVAWDFEDLWIYMTAPVIGAIIGVLTYRSISLKTRP 261
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.183e-15 Identity = 39/96 (40.62%), Postives = 59/96 (61.46%), Query Frame = 1 Query: 70 IQAFVMEFIITFYLMFVISGVATDNR--AIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMV 351 I+ VME ++TF L++ + A D + ++G +A +A+G V N++ AGP +G SMNPARS GPA+VS + +WIY V P +G +Y V Sbjct: 140 IEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDV 235
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.183e-15 Identity = 40/97 (41.24%), Postives = 59/97 (60.82%), Query Frame = 1 Query: 67 NIQAFVMEFIITFYLMFVISGVATDNR--AIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMV 351 +I+ VME IITF L++ + A D + ++G +A LA+G V N++ AGP +G SMNPARS GPA+ + + G W+Y V P +G +Y V Sbjct: 139 SIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGDFSGHWVYWVGPLIGGGLAGLIYGNV 235
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.544e-15 Identity = 40/95 (42.11%), Postives = 57/95 (60.00%), Query Frame = 1 Query: 73 QAFVMEFIITFYLMFVISGVATDNR--AIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMV 351 + VME I+TF L++ + A D + ++G +A +A+G V N++ AGP +G SMNPARS GPA+ S Y +WIY V P +G VY V Sbjct: 140 EGVVMEIIVTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGDYTNIWIYWVGPLVGGGLAGLVYRYV 234
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.017e-15 Identity = 40/98 (40.82%), Postives = 59/98 (60.20%), Query Frame = 1 Query: 64 SNIQAFVMEFIITFYLMFVISGVATDNR--AIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMV 351 S I+ VME +ITF L++ + A D + ++G +A +A+G V N++ AGP +G SMNPARS GPA+ + + G W+Y V P +G VY V Sbjct: 137 SEIEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLVGGGLAGLVYGDV 234 The following BLAST results are available for this feature:
BLAST of CX300349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300349 ID=CX300349; Name=CX300349; organism=Citrus clementina; type=EST; length=622bpback to top |