CX300349
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.634e-15 Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = 1 Query: 64 SNIQAFVMEFIITFYLMFVISGVATDNR--AIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMV 351 S ++ VME +ITF L++ + A D + ++G +A +A+G V N++ AGP +G SMNPARS GPA+ + + G W+Y V P +G VY V Sbjct: 137 SELEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLIGGGLAGLVYGDV 234
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.441e-15 Identity = 41/99 (41.41%), Postives = 58/99 (58.59%), Query Frame = 1 Query: 70 IQAFVMEFIITFYLMFVISGVATDNR--AIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYT 360 IQ VME IITF L++ + A D + ++G +A +A+G V N++ AGP +G SMNPARS GPA+ S + WIY P +G ++Y V T Sbjct: 140 IQGVVMEIIITFALVYTVYATAADPKKGSLGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGDFSQNWIYWAGPLIGGALAGFIYGDVFIT 238
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.494e-15 Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 1 Query: 70 IQAFVMEFIITFYLMFVISGVATDNR--AIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMV 351 ++ VME ++TF L++ + A D + ++G +A +A+G V N++ AGP +G SMNPARS GPA+VS +WIY V P +G +Y V Sbjct: 140 VEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDLSQIWIYWVGPLVGGALAGLIYGDV 235
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.494e-15 Identity = 42/101 (41.58%), Postives = 61/101 (60.40%), Query Frame = 1 Query: 58 AGSN-IQAFVMEFIITFYLMFVISGVATDNR--AIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMV 351 AG N +Q VME IITF L++ + A D + ++G +A +A+G V N++ AGP +G SMNPARS GPA+V+ + WIY P +G ++Y V Sbjct: 135 AGLNGLQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGDFSQNWIYWAGPLIGGGLAGFIYGDV 235
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 7.665e-15 Identity = 42/101 (41.58%), Postives = 60/101 (59.41%), Query Frame = 1 Query: 58 AGSN-IQAFVMEFIITFYLMFVISGVATDNR--AIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMV 351 AG N Q VME IITF L++ + A D + ++G +A +A+G V N++ AGP +G SMNPARS GPA+V+ + WIY P +G ++Y V Sbjct: 135 AGLNGFQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGDFSQNWIYWAGPLIGGGLAGFIYGDV 235
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.001e-14 Identity = 41/117 (35.04%), Postives = 64/117 (54.70%), Query Frame = 1 Query: 7 LRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNR--AIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMV 351 LR + K G + ++ V E +ITF L++ + A D + ++G +A +A+G V N++ AGP +G SMNPARS GPA+ ++ + G W+Y V P +G VY V Sbjct: 119 LRFVTHGKAIPTHGVSGGTTELEGVVFEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAADFAGNWVYWVGPLIGGGLAGLVYGDV 235
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.307e-14 Identity = 40/95 (42.11%), Postives = 58/95 (61.05%), Query Frame = 1 Query: 64 SNIQAFVMEFIITFYLMFVISGVATDNR--AIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVY 342 S + +ME I+TF L++V+ A D + +IG +A LA+G V N++ GP GASMNPAR+ GPA+V ++ WIY V P +G A +Y Sbjct: 148 SELHGLLMEIILTFALVYVVYSTAIDPKRGSIGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALVGWRWSNHWIYWVGPFIGGALAALIY 242
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.708e-14 Identity = 38/98 (38.78%), Postives = 58/98 (59.18%), Query Frame = 1 Query: 64 SNIQAFVMEFIITFYLMFVISGVATDNR--AIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMV 351 S ++ V E +ITF L++ + A D + ++G +A +A+G V N++ AGP +G SMNPARS GPA+ + + G W+Y V P +G VY V Sbjct: 137 SELEGVVFEVVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGDFAGNWVYWVGPLVGGGLAGLVYGDV 234
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.804e-14 Identity = 40/97 (41.24%), Postives = 54/97 (55.67%), Query Frame = 1 Query: 55 PAGSNIQAFVMEFIITFYLMFVISGVATDNR-AIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVY 342 P +A ME ++TF L+F + D R A+G L L VG V N++ GP +GASMNPARS GPA+ + ++ WIY V P +G VY Sbjct: 135 PGVGAARAVAMEAVLTFSLLFAVYATVVDRRRAVGALGPLLVGLVVGANILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVY 231
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.489e-14 Identity = 41/103 (39.81%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 70 IQAFVMEFIITFYLMFVISGVATDNR--AIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYN-MVRYTDKP 369 + V+E I+TF L++V+ D + ++G +A LA+G V N++ GP +GASMNPAR+ GPA+V ++ WIY V P +G+ A +Y MV T+ P Sbjct: 150 VNGLVLEIILTFGLVYVVYSTLIDPKRGSLGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALVGWRWHDHWIYWVGPFIGSALAALIYEYMVIPTEPP 252 The following BLAST results are available for this feature:
BLAST of CX300349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300349 ID=CX300349; Name=CX300349; organism=Citrus clementina; type=EST; length=622bpback to top |