CX300376
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300376 vs. ExPASy Swiss-Prot
Match: AL1A1_RABIT (Retinal dehydrogenase 1 OS=Oryctolagus cuniculus GN=ALDH1A1 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.962e-20 Identity = 43/74 (58.11%), Postives = 54/74 (72.97%), Query Frame = 1 Query: 1 RRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 222 +RAN T +GL+AG+FTK D A T+ AL+AGTVW+NCY V A +PFGG+K+SG GRE G Y L Y +VK V Sbjct: 414 KRANNTTYGLSAGIFTKDLDKAVTVSSALQAGTVWVNCYSVVSAQVPFGGFKMSGNGRELGEYGLQQYTEVKTV 487
BLAST of CX300376 vs. ExPASy Swiss-Prot
Match: AL2C4_ARATH (Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 1.170e-19 Identity = 40/82 (48.78%), Postives = 59/82 (71.95%), Query Frame = 1 Query: 7 ANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPVKNPAWL 252 AN T++GLAAG+ ++ D NT+ R+++AG +W+NCY FD P+GGYK+SG RE G+ +L+ YLQ K+VV P+ N W+ Sbjct: 420 ANNTKYGLAAGILSQDIDLINTVSRSIKAGIIWVNCYFGFDLDCPYGGYKMSGNCRESGMDALDNYLQTKSVVMPLHNSPWM 501
BLAST of CX300376 vs. ExPASy Swiss-Prot
Match: AL1A1_CHICK (Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.607e-19 Identity = 44/74 (59.46%), Postives = 51/74 (68.92%), Query Frame = 1 Query: 1 RRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 222 +RAN T +GLAA VFTK D A T AL+AGTVW+NCY F A PFGG+K+SG GRE G Y L Y +VK V Sbjct: 427 KRANNTTYGLAAAVFTKDIDKALTFASALQAGTVWVNCYSAFSAQCPFGGFKMSGNGRELGEYGLQEYTEVKTV 500
BLAST of CX300376 vs. ExPASy Swiss-Prot
Match: ALDH4_BACSU (Putative aldehyde dehydrogenase dhaS OS=Bacillus subtilis GN=dhaS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.405e-19 Identity = 42/73 (57.53%), Postives = 58/73 (79.45%), Query Frame = 1 Query: 4 RANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 222 RAN + +GLAAG++T++ A+ + L+AGTVW+NCY+VFDAA PFGGYK SG+GRE G Y+L+ Y +VK+V Sbjct: 417 RANHSEYGLAAGLWTENVKQAHYIADRLQAGTVWVNCYNVFDAASPFGGYKQSGLGREMGSYALDNYTEVKSV 489
BLAST of CX300376 vs. ExPASy Swiss-Prot
Match: AL1A1_HUMAN (Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 9.908e-19 Identity = 43/74 (58.11%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 1 RRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 222 +RAN T +GL+AGVFTK D A T+ AL+AGTVW+NCY V A PFGG+K+SG GRE G Y + Y +VK V Sbjct: 419 KRANNTFYGLSAGVFTKDIDKAITISSALQAGTVWVNCYGVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTV 492
BLAST of CX300376 vs. ExPASy Swiss-Prot
Match: ALDH2_MACPR (Aldehyde dehydrogenase, cytosolic 2 (Fragment) OS=Macroscelides proboscideus PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.207e-18 Identity = 43/78 (55.13%), Postives = 53/78 (67.95%), Query Frame = 1 Query: 1 RRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPV 234 +RAN T +GLAAGVFTK D A T+ AL+AGTVW+NCY PFGG+K+SG GRE G Y L+ Y +VK V + Sbjct: 158 KRANNTFYGLAAGVFTKDLDKAVTVSAALQAGTVWVNCYMANSVQCPFGGFKMSGNGRELGEYGLHEYTEVKTVTMKI 235
BLAST of CX300376 vs. ExPASy Swiss-Prot
Match: AL1A1_MACFA (Retinal dehydrogenase 1 OS=Macaca fascicularis GN=ALDH1A1 PE=2 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 4.917e-18 Identity = 42/74 (56.76%), Postives = 52/74 (70.27%), Query Frame = 1 Query: 1 RRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 222 +RAN T +GL+AGVFT D A T+ AL+AGTVW+NCY V A PFGG+K+SG GRE G Y + Y +VK V Sbjct: 419 KRANNTFYGLSAGVFTNDIDKAVTISSALQAGTVWVNCYGVVTAQCPFGGFKMSGNGRELGEYGFHEYTEVKTV 492
BLAST of CX300376 vs. ExPASy Swiss-Prot
Match: AL1A1_HORSE (Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1A1 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.917e-18 Identity = 42/74 (56.76%), Postives = 51/74 (68.92%), Query Frame = 1 Query: 1 RRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 222 +RAN T +GL AG FTK D A T+ AL+AGTVW+NCY V A PFGG+K+SG GRE G Y + Y +VK V Sbjct: 418 KRANNTTYGLFAGSFTKDLDKAITVSAALQAGTVWVNCYGVVSAQCPFGGFKMSGNGREMGEYGFHEYTEVKTV 491
BLAST of CX300376 vs. ExPASy Swiss-Prot
Match: AL1A3_MOUSE (Aldehyde dehydrogenase family 1 member A3 OS=Mus musculus GN=Aldh1a3 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.422e-18 Identity = 45/83 (54.22%), Postives = 56/83 (67.47%), Query Frame = 1 Query: 1 RRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPV--KNP 243 +RAN T +GL A VFTK+ D A + AL +GTVWINCY+ F A PFGG+K+SG GRE G Y+L Y +VK V + KNP Sbjct: 430 KRANSTDYGLTAAVFTKNLDKALKLAAALESGTVWINCYNAFYAQAPFGGFKMSGNGRELGEYALAEYTEVKTVTIKLEEKNP 512
BLAST of CX300376 vs. ExPASy Swiss-Prot
Match: AL1A1_RAT (Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 6.422e-18 Identity = 41/78 (52.56%), Postives = 53/78 (67.95%), Query Frame = 1 Query: 1 RRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPV 234 +RAN T +GLAAGVFTK D A T+ AL+AG VW+NCY + A PFGG+K+SG GRE G + L Y ++K V + Sbjct: 419 KRANNTTYGLAAGVFTKDLDRAITVSSALQAGVVWVNCYMILSAQCPFGGFKMSGNGRELGEHGLYEYTELKTVAMKI 496 The following BLAST results are available for this feature:
BLAST of CX300376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300376 ID=CX300376; Name=CX300376; organism=Citrus clementina; type=EST; length=375bpback to top |