CX300376
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300376 vs. ExPASy Swiss-Prot
Match: AL1A2_MOUSE (Retinal dehydrogenase 2 OS=Mus musculus GN=Aldh1a2 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.339e-15 Identity = 41/81 (50.62%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 4 RANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQ--PVKN 240 RAN + FGL A VFT + A + A++AGTVWINCY+ +A PFGG+K+SG GRE G + L Y +VK V P KN Sbjct: 437 RANNSDFGLVAAVFTNDINKALMVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVTVKIPQKN 517
BLAST of CX300376 vs. ExPASy Swiss-Prot
Match: AL1A2_CHICK (Retinal dehydrogenase 2 OS=Gallus gallus GN=ALDH1A2 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.339e-15 Identity = 39/73 (53.42%), Postives = 49/73 (67.12%), Query Frame = 1 Query: 4 RANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 222 RAN + FGL A VFT + A T+ A++AGTVWINCY+ +A PFGG+K+SG GRE G L Y +VK V Sbjct: 437 RANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGESGLREYSEVKTV 509
BLAST of CX300376 vs. ExPASy Swiss-Prot
Match: BETB_RHILO (Betaine aldehyde dehydrogenase OS=Rhizobium loti GN=betB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.749e-15 Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 1 Query: 4 RANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 222 RAN T FGLAAGVFT+ A+ ++ L+AGT WIN Y++ IPFGG+K SGIGRE + +L Y Q+K++ Sbjct: 404 RANDTEFGLAAGVFTRDLPRAHRVIAELQAGTCWINAYNLTPVEIPFGGFKQSGIGRENSLAALALYSQLKSI 476
BLAST of CX300376 vs. ExPASy Swiss-Prot
Match: BETB_PSEFS (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain SBW25) GN=betB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.749e-15 Identity = 39/74 (52.70%), Postives = 51/74 (68.92%), Query Frame = 1 Query: 1 RRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 222 RRAN T FGLAAG+ TK + A+ ++ L AG WIN + DA +P GGYK SG+GRE GI SLN + ++K+V Sbjct: 406 RRANDTDFGLAAGLVTKDLNRAHRVIHQLEAGICWINAWGESDAKMPVGGYKQSGVGRENGISSLNNFTRIKSV 479
BLAST of CX300376 vs. ExPASy Swiss-Prot
Match: BETB_PSEF5 (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=betB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.749e-15 Identity = 39/74 (52.70%), Postives = 51/74 (68.92%), Query Frame = 1 Query: 1 RRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 222 RRAN T FGLAAG+ TK + A+ ++ L AG WIN + DA +P GGYK SG+GRE GI SLN + ++K+V Sbjct: 406 RRANDTDFGLAAGLVTKDLNRAHRVIHQLEAGICWINAWGESDAKMPVGGYKQSGVGRENGISSLNNFTRIKSV 479
BLAST of CX300376 vs. ExPASy Swiss-Prot
Match: BETB_BRUMB (Betaine aldehyde dehydrogenase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=betB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.749e-15 Identity = 38/73 (52.05%), Postives = 49/73 (67.12%), Query Frame = 1 Query: 4 RANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 222 RAN + FGLAAGVFT + ++ ++AGT WIN Y++ +PFGGYK SGIGRE GI +L Y Q+K V Sbjct: 404 RANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNLTSVEVPFGGYKQSGIGRENGIAALAHYSQIKTV 476
BLAST of CX300376 vs. ExPASy Swiss-Prot
Match: BETB_PSEPF (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain Pf0-1) GN=betB PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.284e-15 Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 1 Query: 1 RRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 222 RRAN T FGLAAG+ T+ + A+ ++ L AG WIN + DA +P GGYK SG+GRE GI SLN + ++K+V Sbjct: 406 RRANDTDFGLAAGIVTRDLNRAHRVIHQLEAGICWINAWGESDAKMPVGGYKQSGVGRENGISSLNNFTRIKSV 479
BLAST of CX300376 vs. ExPASy Swiss-Prot
Match: BETB_BRUSU (Betaine aldehyde dehydrogenase OS=Brucella suis GN=betB PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.284e-15 Identity = 38/73 (52.05%), Postives = 49/73 (67.12%), Query Frame = 1 Query: 4 RANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 222 RAN + FGLAAGVFT + ++ ++AGT WIN Y++ +PFGGYK SGIGRE GI +L Y Q+K V Sbjct: 404 RANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPFGGYKQSGIGRENGIAALAHYSQIKTV 476
BLAST of CX300376 vs. ExPASy Swiss-Prot
Match: BETB_BRUSI (Betaine aldehyde dehydrogenase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=betB PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.284e-15 Identity = 38/73 (52.05%), Postives = 49/73 (67.12%), Query Frame = 1 Query: 4 RANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 222 RAN + FGLAAGVFT + ++ ++AGT WIN Y++ +PFGGYK SGIGRE GI +L Y Q+K V Sbjct: 404 RANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPFGGYKQSGIGRENGIAALAHYSQIKTV 476
BLAST of CX300376 vs. ExPASy Swiss-Prot
Match: BETB_BRUO2 (Betaine aldehyde dehydrogenase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=betB PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.284e-15 Identity = 38/73 (52.05%), Postives = 49/73 (67.12%), Query Frame = 1 Query: 4 RANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 222 RAN + FGLAAGVFT + ++ ++AGT WIN Y++ +PFGGYK SGIGRE GI +L Y Q+K V Sbjct: 404 RANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPFGGYKQSGIGRENGIAALAHYSQIKTV 476 The following BLAST results are available for this feature:
BLAST of CX300376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300376 ID=CX300376; Name=CX300376; organism=Citrus clementina; type=EST; length=375bpback to top |