CX300377
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3PB_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Spinacia oleracea GN=GAPB PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 3.795e-41 Identity = 91/173 (52.60%), Postives = 100/173 (57.80%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKK-TFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 517 VLD++ GI+KGTMTTTHSYTGDQ NIVPTST NGIALRVPTPN K AE+VN AFR++A LKG+L VCD PLVSVDFRC MG DMVKV+AWYDNEWGYSQRVVDLAD+VAN W Sbjct: 249 VLDEELGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNIEKVGVTAEDVNNAFRKAAAGPLKGVLDVCDIPLVSVDFRCSDFSSTIDSSLTMVMGGDMVKVVAWYDNEWGYSQRVVDLADLVANKW 421
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3PA_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Gracilaria verrucosa GN=GAPA PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 4.639e-39 Identity = 82/173 (47.40%), Postives = 99/173 (57.23%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 520 VLD +FG+++G MTTTHSYTGDQ NIVPT+T NGIALRVPTPN SKKTF EEVN A ++A+ +KGI+ DEPLVS D+R MGDDM+KV+AWYDNEWGYSQRVVDL +++A+ WK Sbjct: 244 VLDDEFGVVRGMMTTTHSYTGDQRLLDAGHRDLRRARSAALNIVPTTTGAAKAVALVVPTLAGKLNGIALRVPTPNVSVCDVVMQVSKKTFKEEVNGALLKAANGSMKGIIKYSDEPLVSCDYRGTDESTIIDSSLTMVMGDDMLKVVAWYDNEWGYSQRVVDLGEVMASQWK 416
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P2_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Synechocystis sp. (strain PCC 6803) GN=gap2 PE=1 SV=3) HSP 1 Score: 159.073 bits (401), Expect = 1.350e-38 Identity = 87/173 (50.29%), Postives = 95/173 (54.91%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 520 V++ FGIIKGTMTTTHSYTGDQ NIVPTST NGIALRVPTPN K T AE+VN +E+A+ LKG+L D LVS DFR MG DMVKVIAWYDNEWGYSQRVVDLA+IVA NWK Sbjct: 165 VINDNFGIIKGTMTTTHSYTGDQRILDASHRDLRRARAAAVNIVPTSTGAAKAVALVIPELQGKLNGIALRVPTPNVSVVDLVVQVEKNTIAEQVNGVLKEAANTSLKGVLEYTDLELVSSDFRGTDCSSTVDGSLTMVMGGDMVKVIAWYDNEWGYSQRVVDLAEIVAKNWK 337
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3PA_CHOCR (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Chondrus crispus GN=GAPA PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 5.130e-38 Identity = 80/173 (46.24%), Postives = 97/173 (56.07%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 520 VLD +FG+++G MTTTHSYTGDQ NIVPT+T NGIALRVPTPN +KKTF EEVN A ++++ +KGI+ DEPLVS D R MGDDM+KV+AWYDNEWGYSQRVVDL +++A WK Sbjct: 242 VLDDEFGVVRGMMTTTHSYTGDQRLLDAGHRDLRRARSAALNIVPTTTGAAKAVALVVPSLKGKLNGIALRVPTPNVSVCDVVMQVNKKTFKEEVNGALLKASEGAMKGIIKYSDEPLVSCDHRGTDESTIIDSSLTMVMGDDMIKVVAWYDNEWGYSQRVVDLGEVMARQWK 414
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3PA_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Scenedesmus vacuolatus GN=GapA PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 6.270e-36 Identity = 79/156 (50.64%), Postives = 88/156 (56.41%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWG 469 VLD+KFGI+KGTMT THSYTGDQ NIVPT+T NGIALRVPTPN KKTFAEE+N AF+E+A L G+L+V DEPLVSVDFRC MG DMVKV+AWYDNEWG Sbjct: 159 VLDEKFGIVKGTMTNTHSYTGDQRLLDASHRDLRRARAAALNIVPTTTGAAKAVALVLPKLKGKLNGIALRVPTPNVSVVDLVVQVEKKTFAEEINNAFKEAAAGSLNGVLAVSDEPLVSVDFRCTDVSSTIDSSLTMVMGADMVKVVAWYDNEWG 314
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P2_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap2 PE=3 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 4.064e-35 Identity = 78/172 (45.35%), Postives = 96/172 (55.81%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 517 VL+ KFGIIKG+MTTTHSYTGDQ NIVPTST NG+ALRVPTPN K+T EEVN A +++++ LKGIL + LVS D++ MG+D+VKV+AWYDNEWGYSQRV+DLA++VA W Sbjct: 165 VLNDKFGIIKGSMTTTHSYTGDQRLLDASHRDLRRARAAAINIVPTSTGAAKAVALVIPELKGKLNGVALRVPTPNVSMVDFVVQVEKRTITEEVNQALKDASEGPLKGILDYSELQLVSSDYQGTDASSIVDASLTLVMGNDLVKVMAWYDNEWGYSQRVLDLAELVAEKW 336
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P2_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena sp. (strain PCC 7120) GN=gap2 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.064e-35 Identity = 78/172 (45.35%), Postives = 96/172 (55.81%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 517 VL+ KFGIIKG+MTTTHSYTGDQ NIVPTST NG+ALRVPTPN K+T EEVN A +++++ LKGIL + LVS D++ MG+D+VKV+AWYDNEWGYSQRV+DLA++VA W Sbjct: 165 VLNDKFGIIKGSMTTTHSYTGDQRLLDASHRDLRRARAAAINIVPTSTGAAKAVALVIPELKGKLNGVALRVPTPNVSMVDFVVQVEKRTITEEVNQALKDASEGPLKGILDYSELQLVSSDYQGTDASSIVDANLTLVMGNDLVKVMAWYDNEWGYSQRVLDLAELVAEKW 336
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P1_BACSU (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus subtilis GN=gapA PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 3.685e-28 Identity = 72/169 (42.60%), Postives = 87/169 (51.48%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 508 VL+ KFGI +G MTT HSYT DQ NI+PTST NG A+RVPTPN +++ AEEVNAA +E+A+ +LKGIL +EPLVS D+ M MVKVI+WYDNE GYS RVVDLA +A Sbjct: 163 VLNDKFGIKRGMMTTVHSYTNDQQILDLPHKDYRRARAAAENIIPTSTGAAKAVSLVLPELKGKLNGGAMRVPTPNVSLVDLVAELNQEVTAEEVNAALKEAAEGDLKGILGYSEEPLVSGDYNGNKNSSTIDALSTMVMEGSMVKVISWYDNESGYSNRVVDLAAYIA 331
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P_BACST (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacillus stearothermophilus GN=gap PE=1 SV=5) HSP 1 Score: 121.709 bits (304), Expect = 2.388e-27 Identity = 67/170 (39.41%), Postives = 88/170 (51.76%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 511 VL ++FGI++G MTT HSYT DQ +I+PT+T NG+A+RVPTPN K+ EEVNAA + +A+ ELKGIL+ +EPLVS D+ + MVKV++WYDNE GYS RVVDLA +A+ Sbjct: 163 VLHEQFGIVRGMMTTVHSYTNDQRILDLPHKDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNVSVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALSTMVIDGKMVKVVSWYDNETGYSHRVVDLAAYIAS 332
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P1_BACCE (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus cereus GN=gap1 PE=1 SV=3) HSP 1 Score: 121.324 bits (303), Expect = 3.119e-27 Identity = 68/165 (41.21%), Postives = 85/165 (51.52%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 496 VL++KFG+ +G MTT HSYT DQ N++PTST NG A+RVPT N K+ EEVNAAF+ +A+ ELKGIL +EPLVS+D+ M +MVKV++WYDNE GYS RVVDLA Sbjct: 162 VLNEKFGVKRGMMTTIHSYTNDQQILDLPHKDLRRARAAAENMIPTSTGAAKAVALVLPELKGKLNGGAVRVPTANVSLVDLVVELDKEVTVEEVNAAFKAAAEGELKGILGYSEEPLVSIDYNGCTASSTIDALSTMVMEGNMVKVLSWYDNETGYSNRVVDLA 326 The following BLAST results are available for this feature:
BLAST of CX300377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 321
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300377 ID=CX300377; Name=CX300377; organism=Citrus clementina; type=EST; length=558bpback to top |