CX300377
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3PT_BOVIN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Bos taurus GN=GAPDHS PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.241e-17 Identity = 52/165 (31.52%), Postives = 75/165 (45.45%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 493 V+ ++FGI++G MTT HSYT Q NI+P ST G+A RVPTP+ ++ T + A + +A + GIL+ ++ +VS DF + D+ VK+I+WYDNE+GYS RVVDL Sbjct: 222 VIHERFGILEGLMTTVHSYTATQKTVDGPSKKAWRDGRGAHQNIIPASTGAAKAVGKVIPDLKGKLTGMAFRVPTPDVSVVDLTCRLAQPTPYSAIKDAIKAAAKGPMAGILAYTEDEVVSTDFLSDTHSSIFDAKAGIALNDNFVKLISWYDNEYGYSNRVVDL 386
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P_SPECI (Glyceraldehyde-3-phosphate dehydrogenase OS=Spermophilus citellus GN=GAPDH PE=2 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 2.926e-17 Identity = 51/165 (30.91%), Postives = 72/165 (43.64%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 493 V+ FGI++G MTT H+ T Q NI+P ST G+A RVPTPN K +++ +++++ LKGIL ++ +VS DF + D VK+I+WYDNE+GYS RVVDL Sbjct: 161 VIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDL 325
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P_LENED (Glyceraldehyde-3-phosphate dehydrogenase OS=Lentinula edodes GN=gpd PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.926e-17 Identity = 54/165 (32.73%), Postives = 73/165 (44.24%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 493 V+ KFGI++ MTT H+ T Q NI+P+ST G+A RVPT + K +E+ AA +E++ LKGIL ++ +VS DF + + VK+IAWYDNEWGYS RVVDL Sbjct: 162 VIHDKFGIVEALMTTVHATTATQKTVDGPSNKDWRGGRSVNGNIIPSSTGAAKAVGKVIPSLNGKLTGLAFRVPTLDVSVVDLVCRTEKSATYDEIKAAVKEASKGPLKGILGYTEDHVVSTDFIGDNHSSIFDATAGIQLNKNFVKLIAWYDNEWGYSGRVVDL 326
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P_DROHY (Glyceraldehyde-3-phosphate dehydrogenase OS=Drosophila hydei GN=Gapdh1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.926e-17 Identity = 54/165 (32.73%), Postives = 72/165 (43.64%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 493 V++ F I++ MTT H+ T Q NI+P ST G+A RVPTPN K +E+ A +E+A+ LKGIL DE +VS DF + D VK+I+WYDNE+GYS RV+DL Sbjct: 160 VINDNFEIVEVLMTTVHATTATQKTVDGPSGKLWRDGRGACQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPTPNVSVVDLTVRLGKGASYDEIKAKVQEAANGPLKGILGYTDEEVVSTDFLSDTHSSVFEPKAGISLNDKFVKLISWYDNEFGYSNRVIDL 324
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P_CURLU (Glyceraldehyde-3-phosphate dehydrogenase OS=Curvularia lunata GN=GPD PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.926e-17 Identity = 51/170 (30.00%), Postives = 76/170 (44.71%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 508 V+ K+ II+G MTT HSYT Q NI+P+ST G+A+RVPT N K +E+ A +E+++ L GIL ++ +V+ D + + VK+++WYDNEWGYS+RV+DL +A Sbjct: 162 VIHDKYTIIEGLMTTIHSYTATQKVVDGPSAKDWRGGRTAAQNIIPSSTGAAKAVGKVIPELNGKLTGMAMRVPTANVSVVDLTVRIEKGASYDEIKQAVKEASEGPLSGILGYTEDDIVTTDLNGDNRSSIFDAKAGISLNKNFVKLVSWYDNEWGYSRRVLDLLVYIA 331
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P_CANFA (Glyceraldehyde-3-phosphate dehydrogenase OS=Canis familiaris GN=GAPDH PE=2 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 2.926e-17 Identity = 52/171 (30.41%), Postives = 75/171 (43.86%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 511 V+ FGI++G MTT H+ T Q NI+P ST G+A RVPTPN K +++ +++++ LKGIL ++ +VS DF + D VK+I+WYDNE+GYS RVVDL +A+ Sbjct: 161 VIHDHFGIVEGLMTTVHAITATQKTVDGPSGKMWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVYMAS 331
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3PT_RAT (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus GN=Gapdhs PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.926e-17 Identity = 50/165 (30.30%), Postives = 75/165 (45.45%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 493 V+ ++FGI++G MTT H+YT Q NI+P+ST G+A RVPTPN ++ + A + +A + GIL+ ++ +VS DF + D+ VK+++WYDNE+GYS RVVDL Sbjct: 259 VIHERFGIVEGLMTTVHAYTATQKTVDGPSKKDWRGGRGAHQNIIPSSTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLAQPASYTAIKEAVKAAAKGPMAGILAYTEDQVVSTDFNGDSHSSIFDAKAGIALNDNFVKLVSWYDNEYGYSHRVVDL 423
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3PC_PEA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pisum sativum GN=GAPC1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.926e-17 Identity = 52/165 (31.52%), Postives = 75/165 (45.45%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 493 V++ +FGI++G MTT HS T Q NI+P+ST G++ RVPT + K +E+ AA +E ++ +LKGIL ++ +VS DF + D VK+++WYDNE GYS RVVDL Sbjct: 166 VINDRFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKAATYDEIKAAIKEESEGKLKGILGYTEDDVVSTDFIGDTRSSIFDAKAGIALNDKFVKLVSWYDNELGYSTRVVDL 330
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P4_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 4 OS=Caenorhabditis elegans GN=gpd-4 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.926e-17 Identity = 51/170 (30.00%), Postives = 75/170 (44.12%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 508 V++ FGII+G MTT H+ T Q NI+P ST G+A RVPTP+ K +++ + +AD +KGIL+ ++ +VS DF + + VK+++WYDNE+GYS RVVDL +A Sbjct: 169 VINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGILAYTEDQVVSTDFVSDPHSSIFDTGACISLNPNFVKLVSWYDNEYGYSNRVVDLIGYIA 338
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P1_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Caenorhabditis elegans GN=gpd-1 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.926e-17 Identity = 51/170 (30.00%), Postives = 75/170 (44.12%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 508 V++ FGII+G MTT H+ T Q NI+P ST G+A RVPTP+ K +++ + +AD +KGIL+ ++ +VS DF + + VK+++WYDNE+GYS RVVDL +A Sbjct: 169 VINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGILAYTEDQVVSTDFVSDPHSSIFDAGACISLNPNFVKLVSWYDNEYGYSNRVVDLIGYIA 338 The following BLAST results are available for this feature:
BLAST of CX300377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 321
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300377 ID=CX300377; Name=CX300377; organism=Citrus clementina; type=EST; length=558bpback to top |