CX300377
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P_BACME (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacillus megaterium GN=gap PE=3 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 4.074e-27 Identity = 69/169 (40.83%), Postives = 85/169 (50.30%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 508 VL+ KFG+ +G MTT HSYT DQ NI+PTST NG A+RVPTPN K+ E+VN A +E+A+ +LKGIL +EPLVS D+ M +MVKVI+WYDNE GYS RVVDLA +A Sbjct: 163 VLNDKFGLKRGMMTTVHSYTNDQQILDLPHKDYRRARAAAENIIPTSTGAAKAVSLVLPELKGKLNGGAMRVPTPNVSLVDLVAELDKEVTVEDVNNALKEAAEGDLKGILGYSEEPLVSGDYNGNINSSTIDALSTMVMEGNMVKVISWYDNESGYSNRVVDLAQYIA 331
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P2_BACSU (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Bacillus subtilis GN=gapB PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 7.683e-26 Identity = 67/173 (38.73%), Postives = 81/173 (46.82%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 520 VLD++FGI G MTT H+YT DQ +I+PT+T +G+ALRVP PN AEEVN AF+ +A + G+L DEPLVS D+ M D VKV+AWYDNEWGYS RVVDL VA K Sbjct: 163 VLDEEFGIESGLMTTVHAYTNDQKNIDNPHKDLRRARACGESIIPTTTGAAKALSLVLPHLKGKLHGLALRVPVPNVSLVDLVVDLKTDVTAEEVNEAFKRAAKTSMYGVLDYSDEPLVSTDYNTNPHSAVIDGLTTMVMEDRKVKVLAWYDNEWGYSCRVVDLIRHVAARMK 335
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P_MYCTU (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium tuberculosis GN=gap PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.919e-25 Identity = 65/171 (38.01%), Postives = 82/171 (47.95%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 514 VLD +FGI+KG MTT H+YT DQ NIVPTST +G ALRVP P S + +E+NAAF+ +A+ LKGIL D P+VS D + DD KV++WYDNEWGYS R+VDL +V + Sbjct: 169 VLDDEFGIVKGLMTTIHAYTQDQNLQDGPHKDLRRARAAALNIVPTSTGAAKAIGLVMPQLKGKLDGYALRVPIPTGSVTDLTVDLSTRASVDEINAAFKAAAEGRLKGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVI-DDQAKVVSWYDNEWGYSNRLVDLVTLVGKS 338
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P_MYCBO (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium bovis GN=gap PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.919e-25 Identity = 65/171 (38.01%), Postives = 82/171 (47.95%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 514 VLD +FGI+KG MTT H+YT DQ NIVPTST +G ALRVP P S + +E+NAAF+ +A+ LKGIL D P+VS D + DD KV++WYDNEWGYS R+VDL +V + Sbjct: 169 VLDDEFGIVKGLMTTIHAYTQDQNLQDGPHKDLRRARAAALNIVPTSTGAAKAIGLVMPQLKGKLDGYALRVPIPTGSVTDLTVDLSTRASVDEINAAFKAAAEGRLKGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVI-DDQAKVVSWYDNEWGYSNRLVDLVTLVGKS 338
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P_THEMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Thermotoga maritima GN=gap PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 8.494e-25 Identity = 61/168 (36.31%), Postives = 83/168 (49.40%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIV 505 VL +KFGI+ G +TT HSYT DQ NI+PT+T +G+A+RVPTP+ K+T EEVNA +E+ + LKGI+ DEP+VS D +G +VKV +WYDNE+GYS RVVD +++ Sbjct: 163 VLHEKFGIVSGMLTTVHSYTNDQRVLDLPHKDLRRARAAAVNIIPTTTGAAKAVALVVPEVKGKLDGMAIRVPTPDGSITDLTVLVEKETTVEEVNAVMKEATEGRLKGIIGYNDEPIVSSDIIGTTFSGIFDATITNVIGGKLVKVASWYDNEYGYSNRVVDTLELL 330
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P_MYCAV (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium avium GN=gapA PE=3 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 4.216e-24 Identity = 63/171 (36.84%), Postives = 81/171 (47.37%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 514 VLD +FGI++G MTT H+YT DQ NIVPTST +G ALRVP P K E++NAAF+ +A+ LKGIL D P+VS D + D+ KV++WYDNEWGYS R+VDL +V + Sbjct: 169 VLDDEFGIVRGLMTTIHAYTQDQNLQDGPHKDLRRARAAALNIVPTSTGAAKAIGLVMPNLKGKLDGYALRVPIPTGSVTDLTAELKKPASVEDINAAFKAAAEGRLKGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVI-DNQAKVVSWYDNEWGYSNRLVDLVALVGKS 338
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P2_STAAW (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain MW2) GN=gapA2 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.506e-24 Identity = 65/166 (39.16%), Postives = 81/166 (48.80%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLAD 499 VL+ +FGI+ G MTT H+ T DQ +I+PTST +G+ALRVPT N K+ AEEVN AF + L+GI+ V +PLVSVDF M + VKVIAWYDNEWGYS RVVD+A+ Sbjct: 164 VLNNQFGIVNGLMTTVHAITNDQKNIDNPHKDLRRARSCNESIIPTSTGAAKALKEVLPELEGKLHGMALRVPTKNVSLVDLVVDLEKEVTAEEVNQAFENAG---LEGIIEVEHQPLVSVDFNTNPNSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDVAE 326
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P2_STAAS (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain MSSA476) GN=gapA2 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.506e-24 Identity = 65/166 (39.16%), Postives = 81/166 (48.80%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLAD 499 VL+ +FGI+ G MTT H+ T DQ +I+PTST +G+ALRVPT N K+ AEEVN AF + L+GI+ V +PLVSVDF M + VKVIAWYDNEWGYS RVVD+A+ Sbjct: 164 VLNNQFGIVNGLMTTVHAITNDQKNIDNPHKDLRRARSCNESIIPTSTGAAKALKEVLPELEGKLHGMALRVPTKNVSLVDLVVDLEKEVTAEEVNQAFENAG---LEGIIEVEHQPLVSVDFNTNPNSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDVAE 326
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P2_STAAR (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain MRSA252) GN=gapA2 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.506e-24 Identity = 65/166 (39.16%), Postives = 81/166 (48.80%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLAD 499 VL+ +FGI+ G MTT H+ T DQ +I+PTST +G+ALRVPT N K+ AEEVN AF + L+GI+ V +PLVSVDF M + VKVIAWYDNEWGYS RVVD+A+ Sbjct: 164 VLNNQFGIVNGLMTTVHAITNDQKNIDNPHKDLRRARSCNESIIPTSTGAAKALKEVLPELEGKLHGMALRVPTKNVSLVDLVVDLEKEVTAEEVNQAFENAG---LEGIIEVEHQPLVSVDFNTNPHSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDVAE 326
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P2_STAAN (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain N315) GN=gapA2 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.506e-24 Identity = 65/166 (39.16%), Postives = 81/166 (48.80%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLAD 499 VL+ +FGI+ G MTT H+ T DQ +I+PTST +G+ALRVPT N K+ AEEVN AF + L+GI+ V +PLVSVDF M + VKVIAWYDNEWGYS RVVD+A+ Sbjct: 164 VLNNQFGIVNGLMTTVHAITNDQKNIDNPHKDLRRARSCNESIIPTSTGAAKALKEVLPELEGKLHGMALRVPTKNVSLVDLVVDLEKEVTAEEVNQAFENAG---LEGIIEVEHQPLVSVDFNTNPNSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDVAE 326 The following BLAST results are available for this feature:
BLAST of CX300377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 321
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300377 ID=CX300377; Name=CX300377; organism=Citrus clementina; type=EST; length=558bpback to top |