CX300377
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: E4PD_SALPK (D-erythrose-4-phosphate dehydrogenase OS=Salmonella paratyphi A (strain AKU_12601) GN=epd PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.165e-14 Identity = 45/163 (27.61%), Postives = 64/163 (39.26%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 490 +LD +GI GT+T HS DQ +I+P T IA+RVPT N K A EVN +++A GI+ + PLVS+DF G ++K + W DNEWG++ R++D Sbjct: 166 LLDDAYGIESGTVTAIHSAMNDQQVIDAYHSDLRRTRAASQSIIPVDTKLAAGITRIFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKASEVNQLLQKAAQGAFHGIVDYTESPLVSIDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLD 328
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: E4PD_SALPA (D-erythrose-4-phosphate dehydrogenase OS=Salmonella paratyphi A GN=epd PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.165e-14 Identity = 45/163 (27.61%), Postives = 64/163 (39.26%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 490 +LD +GI GT+T HS DQ +I+P T IA+RVPT N K A EVN +++A GI+ + PLVS+DF G ++K + W DNEWG++ R++D Sbjct: 166 LLDDAYGIESGTVTAIHSAMNDQQVIDAYHSDLRRTRAASQSIIPVDTKLAAGITRIFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKASEVNQLLQKAAQGAFHGIVDYTESPLVSIDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLD 328
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: E4PD_PSEHT (D-erythrose-4-phosphate dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=epd PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.165e-14 Identity = 48/165 (29.09%), Postives = 66/165 (40.00%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 496 VLD FGI G +TT H+ DQ +I+P T IA+RVPT N + VN A + A + L+GILS EPLVS+DF ++K++ W DNEWG++ R++D A Sbjct: 166 VLDDAFGIESGAITTIHASMNDQPVIDAYHHDLRRTRAASQSIIPVDTKLARGIDRILPKFKGRFEAIAVRVPTINVTAMDLSVTVNTDVDLNAVNNALKAQAKDRLEGILSYTAEPLVSIDFNHDPHSCIIDGTQTRVSHKRLIKLLVWCDNEWGFANRMLDTA 330
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: E4PD_CITK8 (D-erythrose-4-phosphate dehydrogenase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=epd PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.746e-14 Identity = 46/163 (28.22%), Postives = 65/163 (39.88%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 490 +LD +GI GT+TT HS DQ +I+P T IA+RVPT N K A EVN +++A GI+ + PLVS+DF G ++K + W DNEWG++ R++D Sbjct: 166 LLDDAYGIESGTVTTIHSAMHDQQVIDAYHSDLRRTRAASQSIIPVDTKLAAGITRIFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNQLLQKAAHGAFHGIVDYTELPLVSIDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLD 328
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: E4PD_SHEDO (D-erythrose-4-phosphate dehydrogenase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=epd PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 8.811e-14 Identity = 45/163 (27.61%), Postives = 64/163 (39.26%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 490 VLD FG+I G +TT HS DQ +I+P T I++RVPT N + +N+ +++A GIL DEPLVS DF +VK++ W DNEWG++ R++D Sbjct: 165 VLDSHFGVISGAITTIHSAMNDQQVIDAYHDDLRRTRAAGQSIIPVDTKLARGIERILPKMKDKFEAISVRVPTINVTAIDVSVTLRDRVDISIINSVLQQAAKGRFDGILGYTDEPLVSCDFNHDPRSSIVDATQTRVSDGHLVKLLLWCDNEWGFANRMLD 327
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: E4PD_SHESW (D-erythrose-4-phosphate dehydrogenase OS=Shewanella sp. (strain W3-18-1) GN=epd PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.151e-13 Identity = 46/163 (28.22%), Postives = 63/163 (38.65%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 490 VLD+ FG+ G +TT HS DQ +I+P T I++RVPT N +K VN +A+ GIL DEPLVS DF +VK++ W DNEWG++ R++D Sbjct: 165 VLDKHFGVKSGAITTIHSAMNDQQVIDAYHDDLRRTRAAGQSIIPVDTKLARGIERILPHMKDKFEAISVRVPTINVTAIDLSVTLAKTVDIASVNQVLELAANGRFNGILGYTDEPLVSCDFNHDPRSSIVDGTQTRVSAGQLVKLLLWCDNEWGFANRMLD 327
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: E4PD_SHEPC (D-erythrose-4-phosphate dehydrogenase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=epd PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.151e-13 Identity = 46/163 (28.22%), Postives = 63/163 (38.65%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 490 VLD+ FG+ G +TT HS DQ +I+P T I++RVPT N +K VN +A+ GIL DEPLVS DF +VK++ W DNEWG++ R++D Sbjct: 165 VLDKHFGVKSGAITTIHSAMNDQQVIDAYHDDLRRTRAAGQSIIPVDTKLARGIERILPHMKDKFEAISVRVPTINVTAIDLSVTLAKTVDIASVNQVLELAANGRFNGILGYTDEPLVSCDFNHDPRSSIVDGTQTRVSAGQLVKLLLWCDNEWGFANRMLD 327
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: E4PD_SHEB2 (D-erythrose-4-phosphate dehydrogenase OS=Shewanella baltica (strain OS223) GN=epd PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.151e-13 Identity = 46/163 (28.22%), Postives = 62/163 (38.04%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 490 VLD+ FG+ G +TT HS DQ +I+P T I++RVPT N K VN +A+ GIL DEPLVS DF +VK++ W DNEWG++ R++D Sbjct: 165 VLDRHFGVKSGAITTIHSAMNDQQVIDAYHDDLRRTRAAGQSIIPVDTKLARGIERILPHMKDKFEAISVRVPTINVTAIDLSVTLEKTVDIATVNHVLESAANGRFNGILGYTDEPLVSCDFNHDPRSSIVDGTQTRVSAGQLVKLLLWCDNEWGFANRMLD 327
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: E4PD_AERS4 (D-erythrose-4-phosphate dehydrogenase OS=Aeromonas salmonicida (strain A449) GN=epd PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.151e-13 Identity = 48/162 (29.63%), Postives = 67/162 (41.36%), Query Frame = 2 Query: 5 LDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 490 L ++F I GT+TT HS DQ +I+P T IA+RVPT N KK +VN A + ++ L GIL +EPLVSVDF ++VK++ W DNEWG++ R++D Sbjct: 166 LHREFEINCGTITTIHSAMHDQQVIDAYHSDLRRTRAASQSIIPVDTKLAKGLERILPHFAGKFEAIAVRVPTINVTAMDLSITVRKKVTVTDVNQALQRASRGTLSGILDYTEEPLVSVDFNHDAHSCIIDGTQTRVSDANLVKMLMWCDNEWGFANRMLD 327
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: E4PD_AERHH (D-erythrose-4-phosphate dehydrogenase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=epd PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.151e-13 Identity = 48/162 (29.63%), Postives = 67/162 (41.36%), Query Frame = 2 Query: 5 LDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 490 L ++F I GT+TT HS DQ +I+P T IA+RVPT N KK +VN A + ++ L GIL +EPLVSVDF ++VK++ W DNEWG++ R++D Sbjct: 166 LHREFEINCGTITTIHSAMHDQQVIDAYHSDLRRTRAASQSIIPVDTKLAKGLERILPHFAGKFEAIAVRVPTINVTAMDLSITVRKKVTVTDVNQALQRASRGTLSGILDYTEEPLVSVDFNHDAHSCIIDGTQTRVSDANLVKMLMWCDNEWGFANRMLD 327 The following BLAST results are available for this feature:
BLAST of CX300377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 321
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300377 ID=CX300377; Name=CX300377; organism=Citrus clementina; type=EST; length=558bpback to top |