CX300377
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P2_STAAM (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gapA2 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.506e-24 Identity = 65/166 (39.16%), Postives = 81/166 (48.80%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLAD 499 VL+ +FGI+ G MTT H+ T DQ +I+PTST +G+ALRVPT N K+ AEEVN AF + L+GI+ V +PLVSVDF M + VKVIAWYDNEWGYS RVVD+A+ Sbjct: 164 VLNNQFGIVNGLMTTVHAITNDQKNIDNPHKDLRRARSCNESIIPTSTGAAKALKEVLPELEGKLHGMALRVPTKNVSLVDLVVDLEKEVTAEEVNQAFENAG---LEGIIEVEHQPLVSVDFNTNPNSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDVAE 326
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P2_STAAC (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain COL) GN=gapA2 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.506e-24 Identity = 65/166 (39.16%), Postives = 81/166 (48.80%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLAD 499 VL+ +FGI+ G MTT H+ T DQ +I+PTST +G+ALRVPT N K+ AEEVN AF + L+GI+ V +PLVSVDF M + VKVIAWYDNEWGYS RVVD+A+ Sbjct: 164 VLNNQFGIVNGLMTTVHAITNDQKNIDNPHKDLRRARSCNESIIPTSTGAAKALKEVLPELEGKLHGMALRVPTKNVSLVDLVVDLEKEVTAEEVNQAFENAG---LEGIIEVEHQPLVSVDFNTNPNSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDVAE 326
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P2_STAEQ (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gapA2 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.227e-23 Identity = 64/166 (38.55%), Postives = 80/166 (48.19%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLAD 499 VL+ KFGII G MTT H+ T DQ +I+PTST +G+ALRVPT N + +VN AF+ + +L G+L V + PLVSVDF MG + VKVIAWYDNEWGYS RVV++AD Sbjct: 164 VLNDKFGIINGLMTTVHAITNDQKNIDNPHKDLRRARSCNESIIPTSTGAAKALKEVLPEVEGKLHGMALRVPTKNVSLVDLVVDLEQNVTVTQVNDAFKNA---DLSGVLDVEEAPLVSVDFNTNPHSAIIDSQSTMVMGQNKVKVIAWYDNEWGYSNRVVEVAD 326
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P_STRCO (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces coelicolor GN=gap PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.602e-23 Identity = 61/171 (35.67%), Postives = 82/171 (47.95%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADN-ELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 511 VLD+ FGI+KG MTT H+YT DQ NI+PT+T +GIA+RVP P ++ +EVNAAF+++AD+ +LKGIL ++ +VS D VK++ WYDNEWGYS R+VDL V N Sbjct: 164 VLDENFGIVKGLMTTVHAYTNDQRILDFPHKDLRRARAAAENIIPTTTGAAKATALVLPQLKGKLDGIAMRVPVPTGSATDLVVELQREVTKDEVNAAFKKAADDGDLKGILFYTEDAIVSSDITGDPASCTFDSSLTMVQEGKSVKILGWYDNEWGYSNRLVDLTVFVGN 334
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P2_STAES (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gapA2 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.087e-23 Identity = 63/165 (38.18%), Postives = 79/165 (47.88%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 496 VL+ KFGII G MTT H+ T DQ +I+PTST +G+ALRVPT N + +VN AF+ + +L G+L V + PLVSVDF MG + VKVIAWYDNEWGYS RVV++A Sbjct: 164 VLNDKFGIINGLMTTVHAITNDQKNIDNPHKDLRRARSCNESIIPTSTGAAKALKEVLPEVEGKLHGMALRVPTKNVSLVDLVVDLEQNVTVTQVNDAFKNA---DLSGVLDVEEAPLVSVDFNTNPHSAIIDSQSTMVMGQNKVKVIAWYDNEWGYSNRVVEVA 325
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P_MYCLE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium leprae GN=gapA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 7.951e-23 Identity = 61/171 (35.67%), Postives = 78/171 (45.61%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 514 VL +FGI+KG MTT H+YT DQ N+VPTST +G ALRVP P SK E+NA F+++A+ LKGIL D P+VS D + KV++WYDNEWGYS R+VDL +V + Sbjct: 169 VLHDQFGIVKGLMTTVHAYTQDQNLQDGPHSDLRRARAAALNVVPTSTGAAKAIGLVMPELKGKLDGYALRVPIPTGSVTDLTADLSKCVSVNEINAVFQDAAEGRLKGILKYVDAPIVSSDIVTDPHSSIFDSGLTKVIA-SQAKVVSWYDNEWGYSNRLVDLVGLVGKS 338
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P_ZYMMO (Glyceraldehyde-3-phosphate dehydrogenase OS=Zymomonas mobilis GN=gap PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.356e-22 Identity = 57/166 (34.34%), Postives = 81/166 (48.80%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADN-ELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 496 VL QK GI++G MTT HS+T DQ +++PTST +GI++RVPTP+ + T AEE+N+ + +AD ++ G+L DEPLVS DF + + +V+AWYDNEWG+S R+VD A Sbjct: 165 VLQQKIGIVRGLMTTVHSFTNDQRILDQIHSDLRRARTASASMIPTSTGAARAVALVIPELKGKLDGISIRVPTPDVSLVDFTFVPQRDTTAEEINSVLKAAADTGDMTGVLGYTDEPLVSRDFYSDPHSSTVDSRETAVLEGKLARVVAWYDNEWGFSNRMVDTA 330
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P_THEAQ (Glyceraldehyde-3-phosphate dehydrogenase OS=Thermus aquaticus GN=gap PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 3.021e-22 Identity = 60/168 (35.71%), Postives = 81/168 (48.21%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIV 505 VL++ FG+ K MTT HSYT DQ NI+PT+T +G+ALRVPT ++ AEEVNAA + +A+ LKGIL+ ++ +V D +G+ MVKV AWYDNEWGY+ RV DL ++V Sbjct: 160 VLEEAFGVEKALMTTVHSYTNDQRLLDLPHKDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTATGSISDITALLKREVTAEEVNAALKAAAEGPLKGILAYTEDEIVLQDIVMDPHSSIVDAKLTKALGN-MVKVFAWYDNEWGYANRVADLVELV 326
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P2_RHOSH (Glyceraldehyde-3-phosphate dehydrogenase B OS=Rhodobacter sphaeroides GN=gapB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.021e-22 Identity = 59/165 (35.76%), Postives = 76/165 (46.06%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 496 VL GI KG MTT HSYTGDQ +++PTST +G+++RVPTPN ++ T EEVNAA +A LKG+L EP VS DF M MV++++WYDNEWG+S R+ D A Sbjct: 162 VLHDAIGIAKGFMTTIHSYTGDQPTLDTMHKDLYRARAAALSMIPTSTGAAKAVGLVLPELKGRLDGVSIRVPTPNVSVVDLVFEAARDTTVEEVNAAIEAAACGPLKGVLGFTTEPNVSSDFNHDPHSSVFHMDQTKVMEGRMVRILSWYDNEWGFSNRMADTA 326
BLAST of CX300377 vs. ExPASy Swiss-Prot
Match: G3P_XANFL (Glyceraldehyde-3-phosphate dehydrogenase OS=Xanthobacter flavus GN=gap PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.499e-21 Identity = 57/165 (34.55%), Postives = 77/165 (46.67%), Query Frame = 2 Query: 2 VLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 496 VL+ GI KG MTT H+YTGDQ +++PTST +G ++RVPTPN + T EE+N A +A +LKGIL D+P VS+DF M +V+V++WYDNEWG+S R+ D A Sbjct: 164 VLNDAVGIEKGFMTTIHAYTGDQPTLDTMHKDLYRARAAAMSMIPTSTGAAKAVGLVLPELAGKLDGTSIRVPTPNVSVIDLKFVAKRATSKEEINEAIIAAASQQLKGILGFTDQPNVSIDFNHNPNSSTFHLDQTKVMEGTLVRVLSWYDNEWGFSNRMSDTA 328 The following BLAST results are available for this feature:
BLAST of CX300377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 321
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300377 ID=CX300377; Name=CX300377; organism=Citrus clementina; type=EST; length=558bpback to top |