CX300380
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300380 vs. ExPASy Swiss-Prot
Match: RL18_BACC3 (50S ribosomal protein L18 OS=Bacillus cereus (strain 03BB102) GN=rplR PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.269e-30 Identity = 67/118 (56.78%), Postives = 83/118 (70.34%), Query Frame = 2 Query: 95 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 448 K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----DLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
BLAST of CX300380 vs. ExPASy Swiss-Prot
Match: RL18_BACC1 (50S ribosomal protein L18 OS=Bacillus cereus (strain ATCC 10987) GN=rplR PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.269e-30 Identity = 67/118 (56.78%), Postives = 83/118 (70.34%), Query Frame = 2 Query: 95 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 448 K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----DLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
BLAST of CX300380 vs. ExPASy Swiss-Prot
Match: RL18_BACAN (50S ribosomal protein L18 OS=Bacillus anthracis GN=rplR PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.269e-30 Identity = 67/118 (56.78%), Postives = 83/118 (70.34%), Query Frame = 2 Query: 95 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 448 K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----DLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
BLAST of CX300380 vs. ExPASy Swiss-Prot
Match: RL18_BACAC (50S ribosomal protein L18 OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=rplR PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.269e-30 Identity = 67/118 (56.78%), Postives = 83/118 (70.34%), Query Frame = 2 Query: 95 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 448 K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----DLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
BLAST of CX300380 vs. ExPASy Swiss-Prot
Match: RL18_BACAA (50S ribosomal protein L18 OS=Bacillus anthracis (strain A0248) GN=rplR PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.269e-30 Identity = 67/118 (56.78%), Postives = 83/118 (70.34%), Query Frame = 2 Query: 95 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 448 K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----DLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
BLAST of CX300380 vs. ExPASy Swiss-Prot
Match: RK18_CYAPA (50S ribosomal protein L18, cyanelle OS=Cyanophora paradoxa GN=rpl18 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.269e-30 Identity = 64/119 (53.78%), Postives = 88/119 (73.95%), Query Frame = 2 Query: 92 TKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 448 T+++ RH R+R+K+ GT ERPRL VFRS++H+Y Q+IDDT+ TLA++ST++ + + + SS T S VG++IAK LEKGIT+V FDRGG YHGR++ LA+AARE GLQF Sbjct: 4 TRKQATQRRHRRVRRKVFGTSERPRLAVFRSHQHIYAQIIDDTQHRTLAASSTLEPSVKNS-ELSSTSTCAASAIVGQLIAKKALEKGITQVVFDRGGKIYHGRVRTLAEAAREAGLQF 121
BLAST of CX300380 vs. ExPASy Swiss-Prot
Match: RL18_MICAN (50S ribosomal protein L18 OS=Microcystis aeruginosa (strain NIES-843) GN=rplR PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 2.964e-30 Identity = 64/119 (53.78%), Postives = 86/119 (72.27%), Query Frame = 2 Query: 92 TKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 448 +++E RH R+R+KI+GT ERPRL VFRSN H+Y Q+IDD HTLA+AST++ + EL+ S T E S VG+++A+ L+KGI +V FDRGG YHGR++ALA+AAR GL F Sbjct: 4 SRKESVRRRHQRVRRKINGTAERPRLSVFRSNNHIYAQIIDDVAQHTLAAASTLEATLRGELE--STATQEASAAVGKLVAQRALDKGIEQVVFDRGGNLYHGRVKALAEAARSAGLNF 120
BLAST of CX300380 vs. ExPASy Swiss-Prot
Match: RL18_HELMI (50S ribosomal protein L18 OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=rplR PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 3.871e-30 Identity = 68/114 (59.65%), Postives = 81/114 (71.05%), Query Frame = 2 Query: 107 RTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 448 R +H RIRK++ GT ERPRLCVFRS H+Y QV++D TL +AS++ + SG IE +KKVGE+IAK LEKGI KV FDRGGY YHGRI ALA+AARE GLQF Sbjct: 11 RQKKHMRIRKRVKGTEERPRLCVFRSLNHIYAQVVNDVTGRTLVAASSLDGEF--KAANVSGGNIEGAKKVGELIAKKALEKGIDKVVFDRGGYIYHGRIAALAEAAREAGLQF 122
BLAST of CX300380 vs. ExPASy Swiss-Prot
Match: RL18_THELT (50S ribosomal protein L18 OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=rplR PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 5.055e-30 Identity = 67/122 (54.92%), Postives = 87/122 (71.31%), Query Frame = 2 Query: 95 KREDRT----ARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 448 K+EDR RH RIRKK+ GT ERPRL VFRS KH+Y Q+IDDTK HTL SAST+ + + + E +K+VG+++A+ L KGI++V FDRGG+ +HGRI+ LADAARE GL+F Sbjct: 3 KKEDRKFKRIKRHLRIRKKVFGTSERPRLSVFRSEKHIYAQIIDDTKGHTLVSASTLDPDLRARIAKTYNK--EAAKEVGKLVAQKALSKGISQVVFDRGGFKFHGRIRELADAAREAGLKF 122
BLAST of CX300380 vs. ExPASy Swiss-Prot
Match: RL18_CLOBB (50S ribosomal protein L18 OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=rplR PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 5.055e-30 Identity = 64/118 (54.24%), Postives = 84/118 (71.19%), Query Frame = 2 Query: 95 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 448 K+ RT RH R+RKK+ GTP+RPRL VFRS K++YVQ+IDD T+ +AS++ K E ++G E +K VG +AK +EKGIT+V FDRGGY YHGR+Q LA+ ARE GL+F Sbjct: 7 KKASRTKRHLRVRKKVFGTPDRPRLSVFRSEKNIYVQIIDDVNAVTIVAASSLDK----EFSTNNGGNKEGAKLVGAAVAKKAIEKGITEVVFDRGGYVYHGRVQELAEGAREAGLKF 120 The following BLAST results are available for this feature:
BLAST of CX300380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300380 ID=CX300380; Name=CX300380; organism=Citrus clementina; type=EST; length=495bpback to top |