CX300393

Overview
NameCX300393
Unique NameCX300393
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length512
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig783 contig Ccv1_Contig783:12..523. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANXA8_PANTR (Annexin A8 OS=Pan troglodytes GN=ANXA8 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.039e-12
Identity = 36/123 (29.27%), Postives = 65/123 (52.85%), Query Frame = 2
Query:   92 IRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLG 460
            I IL TRS   +     +Y+ +    I+  ++++      + +   V+C      YF + L  A+   GT +G L R + +R+E+DL +IK  +++     L   +++DTSGDY+  LL+L+G
Sbjct:  202 ITILCTRSATHLLRVFEEYEKIANKSIEDSIKSETHGSLEEAMLTVVKCTQNLHSYFAERLYYAMKGAGTRDGTLIRNIVSRSEIDLNLIKCHFKKMYGKTLSSMIMEDTSGDYKNALLSLVG 324          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANXA8_RAT (Annexin A8 OS=Rattus norvegicus GN=Anxa8 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.357e-12
Identity = 43/147 (29.25%), Postives = 72/147 (48.98%), Query Frame = 2
Query:   23 LAKSEAKILHEKISNKTYNDE-DLIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLG 460
            LA  +A+ LH         DE   I IL TRS   +     +Y+ +    I+  ++++      + +   V+C      YF + L  A+   GT +G L R + +R+E+DL +IK ++Q+     L   ++ DTSG Y+  LL L+G
Sbjct:  178 LALQDAQDLHAAGEKILGTDEMKFITILCTRSATHLMRVFEEYEKIANKSIEDSIKSETHGSLEEAMLTVVKCTRNVHSYFAERLYYAMKGAGTLDGTLIRNIVSRSEIDLNLIKSQFQKMYGKTLSSMIMGDTSGYYKTALLNLVG 324          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANXA8_MOUSE (Annexin A8 OS=Mus musculus GN=Anxa8 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.157e-12
Identity = 42/147 (28.57%), Postives = 71/147 (48.30%), Query Frame = 2
Query:   23 LAKSEAKILHEKISNKTYNDE-DLIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLG 460
            L   +A+ LHE        DE   I IL TRS   +     +Y+ +    I+   +++      + +   V+C      YF + L  A+   GT +G L R + +R+E+DL +IK ++++     L   ++ DTSG Y+  LL L+G
Sbjct:  178 LVLQDAQALHEAGEKIMGTDEMKFITILCTRSLTHLMRVFEEYEKIADKCIEDSFKSETHGSLEEAMLTVVKCTRNVHSYFAERLYYAMKGAGTRDGTLIRNIVSRSEIDLNLIKGQFRKMYGKTLSSMIMADTSGYYKTALLNLVG 324          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANXA1_RODSP (Annexin A1 OS=Rodentia sp. GN=ANXA1 PE=2 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 8.796e-12
Identity = 42/151 (27.81%), Postives = 76/151 (50.33%), Query Frame = 2
Query:   11 VNITLAKSEAKILHEKISNKTYNDEDLIR-ILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLG 460
            VN  +A ++A+ L++    +   D ++   IL T+    +      Y+     D+ + L+ + K +    L    +C      +F + L  A+   GT    L R++ +R+E+D   IK  YQ++  VPL +A++ +T G YEK+L+AL G
Sbjct:  194 VNQDIADTDARALYQAAERRNGTDVNVFNTILTTKKYPHLRNKFQNYRKYTEEDMKKALDIELKGQIEKCLTTIAKCGTSTPAFFAEKLYEAMKGAGTRHKTLIRIMVSRSEIDSDQIKVFYQKKYGVPLCQAILDETKGAYEKILVALEG 344          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANX12_HYDAT (Annexin-B12 OS=Hydra attenuata GN=ANXB12 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 8.796e-12
Identity = 44/154 (28.57%), Postives = 76/154 (49.35%), Query Frame = 2
Query:    5 DEVNITLAKSEAKILHEKISNKTYNDEDLIR-ILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGH 463
            + VN   A  +A  +++    +   DE     +LATRS  Q++   ++Y  +    I Q +E +   +  + L A V+ +     YF + L  A+   GT +  L R++ +R+E+DL  IK+ +Q      L   +  D SGDY+ +LL + GH
Sbjct:  163 EPVNAAHAAEDAAAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLLAIVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSLYEFIADDCSGDYKDLLLQITGH 316          

HSP 2 Score: 68.5514 bits (166), Expect = 1.960e-11
Identity = 35/147 (23.81%), Postives = 79/147 (53.74%), Query Frame = 2
Query:   26 AKSEAKILHEKISNKTYNDEDLIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGHG 466
            ++ +A+ L + +     +++ +  ILATRS AQ       Y  ++G  ++ +L+++    Y     A +  L +P+ +  + L  A+   GTDE AL  ++ T++   +  IK  ++      L++ ++ +TSG+++++L+++L  G
Sbjct:   15 SREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNY---EAAALALLRKPDEFLAEQLHAAMKGLGTDENALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSMLQGG 158          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANXA2_MOUSE (Annexin A2 OS=Mus musculus GN=Anxa2 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 3.343e-11
Identity = 42/157 (26.75%), Postives = 78/157 (49.68%), Query Frame = 2
Query:    2 GDEVNITLAKSEAKILHEK-ISNKTYNDEDLIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGHGD 469
            G  ++  L   +A+ L++  +  K  +    I I+  RS   +     +YK+    D+ + ++ + K +  +     VQC+     YF   L  ++  +GT +  L R++ +R+EVD+  I+ E++R+    L   + +DT GDY+K LL L G  D
Sbjct:  183 GSVIDYELIDQDARELYDAGVKRKGTDVPKWISIMTERSVCHLQKVFERYKSYSPYDMLESIKKEVKGDLENAFLNLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKRKYGKSLYYYIQQDTKGDYQKALLYLCGGDD 339          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANXA2_CANFA (Annexin A2 OS=Canis familiaris GN=ANXA2 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.343e-11
Identity = 42/157 (26.75%), Postives = 78/157 (49.68%), Query Frame = 2
Query:    2 GDEVNITLAKSEAKILHEK-ISNKTYNDEDLIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGHGD 469
            G  ++  L   +A+ L++  +  K  +    I I+  RS   +     +YK+    D+ + ++ + K +  +     VQC+     YF   L  ++  +GT +  L R++ +R+EVD+  I+ E++R+    L   + +DT GDY+K LL L G  D
Sbjct:  183 GSVIDYELIDQDARDLYDAGVKRKGTDVPKWISIMTERSVCHLQKVFERYKSYSPYDMLESIKKEVKGDLENAFLNLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKRKYGKSLYYYIQQDTKGDYQKALLYLCGGDD 339          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANXA2_RAT (Annexin A2 OS=Rattus norvegicus GN=Anxa2 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 4.365e-11
Identity = 42/157 (26.75%), Postives = 77/157 (49.04%), Query Frame = 2
Query:    2 GDEVNITLAKSEAKILHEK-ISNKTYNDEDLIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGHGD 469
            G  ++  L   +A+ L++  +  K  +    I I+  RS   +     +YK+    D+ + +  + K +  +     VQC+     YF   L  ++  +GT +  L R++ +R+EVD+  I+ E++R+    L   + +DT GDY+K LL L G  D
Sbjct:  183 GSVIDYELIDQDARELYDAGVKRKGTDVPKWISIMTERSVCHLQKVFERYKSYSPYDMLESIRKEVKGDLENAFLNLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKRKYGKSLYYFIQQDTKGDYQKALLYLCGGDD 339          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANXA2_PONAB (Annexin A2 OS=Pongo abelii GN=ANXA2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.365e-11
Identity = 42/157 (26.75%), Postives = 78/157 (49.68%), Query Frame = 2
Query:    2 GDEVNITLAKSEAKILHEK-ISNKTYNDEDLIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGHGD 469
            G  ++  L   +A+ L++  +  K  +    I I+  RS   +    ++YK+    D+ + +  + K +  +     VQC+     YF   L  ++  +GT +  L R++ +R+EVD+  I+ E++R+    L   + +DT GDY+K LL L G  D
Sbjct:  183 GSVIDYELIDQDARDLYDAGVKRKGTDVPKWISIMTERSVPHLQKVFDRYKSYSPYDMLESIRKEVKGDLENAFLNLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKRKYGKSLYYYIQQDTKGDYQKALLYLCGGDD 339          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANXA2_HUMAN (Annexin A2 OS=Homo sapiens GN=ANXA2 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 4.365e-11
Identity = 42/157 (26.75%), Postives = 78/157 (49.68%), Query Frame = 2
Query:    2 GDEVNITLAKSEAKILHEK-ISNKTYNDEDLIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGHGD 469
            G  ++  L   +A+ L++  +  K  +    I I+  RS   +    ++YK+    D+ + +  + K +  +     VQC+     YF   L  ++  +GT +  L R++ +R+EVD+  I+ E++R+    L   + +DT GDY+K LL L G  D
Sbjct:  183 GSVIDYELIDQDARDLYDAGVKRKGTDVPKWISIMTERSVPHLQKVFDRYKSYSPYDMLESIRKEVKGDLENAFLNLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKRKYGKSLYYYIQQDTKGDYQKALLYLCGGDD 339          
The following BLAST results are available for this feature:
BLAST of CX300393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
ANXA8_PANTR1.039e-1229.27Annexin A8 OS=Pan troglodytes GN=ANXA8 PE=2 SV=1[more]
ANXA8_RAT1.357e-1229.25Annexin A8 OS=Rattus norvegicus GN=Anxa8 PE=1 SV=1[more]
ANXA8_MOUSE5.157e-1228.57Annexin A8 OS=Mus musculus GN=Anxa8 PE=2 SV=1[more]
ANXA1_RODSP8.796e-1227.81Annexin A1 OS=Rodentia sp. GN=ANXA1 PE=2 SV=3[more]
ANX12_HYDAT8.796e-1228.57Annexin-B12 OS=Hydra attenuata GN=ANXB12 PE=1 SV=1[more]
ANXA2_MOUSE3.343e-1126.75Annexin A2 OS=Mus musculus GN=Anxa2 PE=1 SV=2[more]
ANXA2_CANFA3.343e-1126.75Annexin A2 OS=Canis familiaris GN=ANXA2 PE=1 SV=1[more]
ANXA2_RAT4.365e-1126.75Annexin A2 OS=Rattus norvegicus GN=Anxa2 PE=1 SV=2[more]
ANXA2_PONAB4.365e-1126.75Annexin A2 OS=Pongo abelii GN=ANXA2 PE=2 SV=1[more]
ANXA2_HUMAN4.365e-1126.75Annexin A2 OS=Homo sapiens GN=ANXA2 PE=1 SV=2[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC07009F12SK SaltLeaf1 Citrus clementina cDNA clone C07009F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300393 ID=CX300393; Name=CX300393; organism=Citrus clementina; type=EST; length=512bp
GGGTGATGAGGTGAACATTACACTTGCAAAATCAGAAGCTAAGATTCTCC
ATGAGAAGATTTCGAATAAGACTTACAATGATGAGGATCTCATCAGGATC
TTGGCTACAAGGAGCAAAGCACAGATCAATGCGACTCTGAATCAATACAA
GAATGTATATGGGAATGATATTGATCAGGACTTAGAGGCTGACCCTAAAG
ATGAGTACCTCGACCTACTGAGGGCCACAGTTCAGTGCTTAGTCCGCCCT
GAACATTATTTTGAGAAGATACTTCGTCTGGCAATTAACAAACAGGGAAC
AGATGAAGGGGCTCTTACTAGAGTCGTCACCACAAGGGCCGAGGTCGACT
TGAAGGTCATAAAAGATGAGTACCAGAGGAGGAACAGTGTTCCTCTGGAT
CGCGCCGTTGTCAAGGACACCTCTGGGGACTACGAAAAAATGCTTCTGGC
ACTTTTAGGACATGGGGATGCTTGAGTTGTTCCCTATTTCTTGAAGGATT
GAGAGGCAATAT
back to top