CX300393

Overview
NameCX300393
Unique NameCX300393
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length512
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig783 contig Ccv1_Contig783:12..523. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANX11_DROME (Annexin-B11 OS=Drosophila melanogaster GN=Anxb11 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.365e-11
Identity = 42/151 (27.81%), Postives = 78/151 (51.66%), Query Frame = 2
Query:   11 VNITLAKSEAKILHEKISNKTYNDEDLIR-ILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLG 460
            V+   AK++A+ L +    +   DE +   IL  R+  Q+     +Y+ + G+ +++ ++ +   + ++ L A  +C+     YF   L  A+   GT++  L RV+ TR+E+D+  IK  ++R     L   +  DTSG Y+  L AL+G
Sbjct:  167 VDPVAAKNDARELLKAGELRVGTDESMFNMILCQRNYQQLKLIFQEYEGMTGHSLEKAIKKEFSGDVMEGLIAIYRCVTNKAEYFASRLHKAMAGIGTNDTQLIRVIITRSEIDMTDIKVAFERLYGKSLKSWIKGDTSGHYKHALYALVG 317          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANX11_COLLI (Annexin A1 isoform p35 OS=Columba livia GN=CP35 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.365e-11
Identity = 40/150 (26.67%), Postives = 75/150 (50.00%), Query Frame = 2
Query:   11 VNITLAKSEAKILHEKISNKTYNDEDLIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLG 460
            VN  LA+ +A+ L+E    K   D ++   + T      +    +Y     +D+++ ++ + K +    L A V+C      +F + L +A+   GT    L R++ +R EVD+  IK  Y++   + L +A++ +  G YE +L+AL G
Sbjct:  189 VNDELAEKDARALYEAGEQKKGTDINVFVTVLTARSYPHSEVFQKYTKYSKHDMNKAVDMEMKGDIEKCLTALVKCATSKPAFFAEKLHMAMKGFGTQHRDLIRIMVSRHEVDMNEIKGYYKKMYGISLCQAIMDELKGGYETILVALCG 338          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANXA2_SHEEP (Annexin A2 OS=Ovis aries GN=ANXA2 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.446e-11
Identity = 41/157 (26.11%), Postives = 78/157 (49.68%), Query Frame = 2
Query:    2 GDEVNITLAKSEAKILHEK-ISNKTYNDEDLIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGHGD 469
            G  ++  L   +A+ L++  +  K  +    I I+  RS   +     +YK+    D+ + ++ + K +  +     VQC+     YF   L  ++  +GT +  L R++ +R+EVD+  I+ E++++    L   + +DT GDY+K LL L G  D
Sbjct:  183 GSVIDYELIDQDARDLYDAGVKRKGTDVPKWISIMTERSVCHLQKVFERYKSYSPYDMLESIKKEVKGDLENAFLNLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKKKYGKSLYYYIQQDTKGDYQKALLYLCGGDD 339          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANXA2_CHICK (Annexin A2 OS=Gallus gallus GN=ANXA2 PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 7.446e-11
Identity = 41/154 (26.62%), Postives = 77/154 (50.00%), Query Frame = 2
Query:   11 VNITLAKSEAKILHEK-ISNKTYNDEDLIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGHGD 469
            ++  L   +A+ L++  +  K  +    I I+  RS   +     +YK+    D+ + ++ + K +  +     VQC+   + YF   L  ++  +GT +  L R++ +R EVD+  IK E++R+    L   + +DT GDY++ LL L G  D
Sbjct:  186 IDYELIDQDARELYDAGVKRKGTDVPKWINIMTERSVPHLQKVFERYKSYSPYDMLESIKKEVKGDLENAFLNLVQCIQNKQLYFADRLYDSMKGKGTRDKVLIRIMVSRCEVDMLKIKSEFKRKYGKSLYYFIQQDTKGDYQRALLNLCGGED 339          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANXA2_CEREL (Annexin A2 OS=Cervus elaphus GN=ANXA2 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.446e-11
Identity = 41/157 (26.11%), Postives = 78/157 (49.68%), Query Frame = 2
Query:    2 GDEVNITLAKSEAKILHEK-ISNKTYNDEDLIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGHGD 469
            G  ++  L   +A+ L++  +  K  +    I I+  RS   +     +YK+    D+ + ++ + K +  +     VQC+     YF   L  ++  +GT +  L R++ +R+EVD+  I+ E++++    L   + +DT GDY+K LL L G  D
Sbjct:  183 GSVIDYELIDQDARDLYDAGVKXKXTDVPKWISIMTERSVCHLQKVFERYKSYSPYDMLESIKKEVKGDLENAFLNLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKKKYGKSLYYYIQQDTKGDYQKALLYLCGGDD 339          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANXA2_BOVIN (Annexin A2 OS=Bos taurus GN=ANXA2 PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 7.446e-11
Identity = 41/157 (26.11%), Postives = 78/157 (49.68%), Query Frame = 2
Query:    2 GDEVNITLAKSEAKILHEK-ISNKTYNDEDLIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGHGD 469
            G  ++  L   +A+ L++  +  K  +    I I+  RS   +     +YK+    D+ + ++ + K +  +     VQC+     YF   L  ++  +GT +  L R++ +R+EVD+  I+ E++++    L   + +DT GDY+K LL L G  D
Sbjct:  183 GSVIDYELIDQDARDLYDAGVKRKGTDVPKWISIMTERSVCHLQKVFERYKSYSPYDMLESIKKEVKGDLENAFLNLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKKKYGKSLYYYIQQDTKGDYQKALLYLCGGDD 339          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANXA7_DICDI (Annexin A7 OS=Dictyostelium discoideum GN=nxnA PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.725e-11
Identity = 35/139 (25.18%), Postives = 72/139 (51.80%), Query Frame = 2
Query:   29 KSEAKILHEKISNKTYNDEDLIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKML 445
            K +A++L + +     N+ DLI++LA R+ A+      ++   Y  D+ QD++++    +   L   V  L  P H+  + +  A    GT+E  +  ++ TR+ V ++ IK  ++ ++   L   +  + SGD++K+L
Sbjct:  164 KHDAEVLRKAMKGIGTNESDLIKVLANRNWAEREQIKREFSAKYSKDLIQDIKSETSGNFEKCL---VALLTEPAHFDVEQIHSACAGAGTNENTIIEILVTRSNVQMEYIKQIFKNKHGKSLKDRLESEASGDFKKLL 299          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANXA2_PIG (Annexin A2 OS=Sus scrofa GN=ANXA2 PE=1 SV=4)

HSP 1 Score: 66.2402 bits (160), Expect = 9.725e-11
Identity = 41/157 (26.11%), Postives = 77/157 (49.04%), Query Frame = 2
Query:    2 GDEVNITLAKSEAKILHEK-ISNKTYNDEDLIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGHGD 469
            G  ++  L   +A+ L++  +  K  +    I I+  RS   +     +YK+    D+ + ++ + K +  +     VQC+     YF   L  ++  +GT +  L  ++ +R+EVD+  I+ E++R+    L   + +DT GDY+K LL L G  D
Sbjct:  183 GSVIDYELIDQDARDLYDAGVKRKGTDVPKWISIMTERSVCHLQKVFERYKSYSPYDMLESIKKEVKGDLENAFLNLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIXIMVSRSEVDMLKIRSEFKRKYGKSLYNYIQQDTKGDYQKALLYLCGGDD 339          
The following BLAST results are available for this feature:
BLAST of CX300393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
ANX11_DROME4.365e-1127.81Annexin-B11 OS=Drosophila melanogaster GN=Anxb11 P... [more]
ANX11_COLLI4.365e-1126.67Annexin A1 isoform p35 OS=Columba livia GN=CP35 PE... [more]
ANXA2_SHEEP7.446e-1126.11Annexin A2 OS=Ovis aries GN=ANXA2 PE=1 SV=1[more]
ANXA2_CHICK7.446e-1126.62Annexin A2 OS=Gallus gallus GN=ANXA2 PE=1 SV=2[more]
ANXA2_CEREL7.446e-1126.11Annexin A2 OS=Cervus elaphus GN=ANXA2 PE=2 SV=1[more]
ANXA2_BOVIN7.446e-1126.11Annexin A2 OS=Bos taurus GN=ANXA2 PE=1 SV=2[more]
ANXA7_DICDI9.725e-1125.18Annexin A7 OS=Dictyostelium discoideum GN=nxnA PE=... [more]
ANXA2_PIG9.725e-1126.11Annexin A2 OS=Sus scrofa GN=ANXA2 PE=1 SV=4[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC07009F12SK SaltLeaf1 Citrus clementina cDNA clone C07009F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300393 ID=CX300393; Name=CX300393; organism=Citrus clementina; type=EST; length=512bp
GGGTGATGAGGTGAACATTACACTTGCAAAATCAGAAGCTAAGATTCTCC
ATGAGAAGATTTCGAATAAGACTTACAATGATGAGGATCTCATCAGGATC
TTGGCTACAAGGAGCAAAGCACAGATCAATGCGACTCTGAATCAATACAA
GAATGTATATGGGAATGATATTGATCAGGACTTAGAGGCTGACCCTAAAG
ATGAGTACCTCGACCTACTGAGGGCCACAGTTCAGTGCTTAGTCCGCCCT
GAACATTATTTTGAGAAGATACTTCGTCTGGCAATTAACAAACAGGGAAC
AGATGAAGGGGCTCTTACTAGAGTCGTCACCACAAGGGCCGAGGTCGACT
TGAAGGTCATAAAAGATGAGTACCAGAGGAGGAACAGTGTTCCTCTGGAT
CGCGCCGTTGTCAAGGACACCTCTGGGGACTACGAAAAAATGCTTCTGGC
ACTTTTAGGACATGGGGATGCTTGAGTTGTTCCCTATTTCTTGAAGGATT
GAGAGGCAATAT
back to top