CX300408

Overview
NameCX300408
Unique NameCX300408
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length470
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300408 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.812e-15
Identity = 47/120 (39.17%), Postives = 69/120 (57.50%), Query Frame = -2
Query:  110 SVLDTSFRLSLWNVENSPSRSFDQF---VWNSMNEAVNQALSTTKMFATVKKNYTASQTLYSLVQCTPDLSRDDCSRCLRLAISPLDGCCSIKIGGRVMYPSCNFRYELYQFYNDTSNGT 460
            + L+T   + + +  N  S   DQF   V   MN A  +A  + K +A  K +  ASQ+LY +V+CTPDL   DC  CL++ I+ +      KIGGR++ PSC  RY+ Y FYN+++ GT
Sbjct:  131 ATLNTDGGMFMQSARNPLSVKQDQFRDLVLTPMNLAAVEAARSFKKWAVRKIDLNASQSLYGMVRCTPDLREQDCLDCLKIGINQV---TYDKIGGRILLPSCASRYDNYAFYNESNVGT 247          
BLAST of CX300408 vs. ExPASy Swiss-Prot
Match: CRR38_ARATH (Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana GN=CRRSP38 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.174e-14
Identity = 48/115 (41.74%), Postives = 63/115 (54.78%), Query Frame = -2
Query:  134 SFFSVLDTSFRLSLWNVEN-SPSRSFDQFVWNSMNEAVNQALS--TTKMFATVKKNYTASQTLYSLVQCTPDLSRDDCSRCLRLAISPLDGCCSIKIGGRVMYPSCNFRYELYQF 469
            +FF  +D   R  L+NV+N S   +F+      + E   +A +    K+FAT +KN   ++ LY LVQCT DL    C  CL   I  L  CC  K GGRV+  SCNFRYE+Y F
Sbjct:  135 NFFGKIDFENRFYLYNVKNVSDPSTFNSQTKALLTELTKKATTRDNQKLFATGEKNIGKNK-LYGLVQCTRDLKSITCKACLNGIIGELPNCCDGKEGGRVVGGSCNFRYEIYPF 248          
BLAST of CX300408 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.003e-14
Identity = 45/120 (37.50%), Postives = 68/120 (56.67%), Query Frame = -2
Query:  119 SFFSVLDTSFRLSLWNVENSPSRS---FDQFVWNSMNEAVNQALSTTKMFATVKKNYTASQTLYSLVQCTPDLSRDDCSRCLRLAISPLDGCCSIKIGGRVMYPSCNFRYELYQFYNDTS 469
            +  S  +T+  + L N +N  S     F   V  +MN+A   A +++K F     N+T   +LY+LVQCT DL+R DC  CL+  I+ L    + KIGG+ + PSC+ R+EL  FYN ++
Sbjct:  243 NILSTSNTNGGIILANSQNMTSNEQARFKDLVLTTMNQATIAAANSSKRFDARSANFTTLHSLYTLVQCTHDLTRQDCLSCLQQIINQLP---TEKIGGQFIVPSCSSRFELCLFYNQSA 359          
BLAST of CX300408 vs. ExPASy Swiss-Prot
Match: CRR25_ARATH (Putative cysteine-rich repeat secretory protein 25 OS=Arabidopsis thaliana GN=CRRSP25 PE=5 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.696e-13
Identity = 44/123 (35.77%), Postives = 67/123 (54.47%), Query Frame = -2
Query:  134 SFFSVLDTSFRLSLWNVENSPSRSFDQFVWNSMNEAVNQAL---STTKMFATVKKNYTAS--------QTLYSLVQCTPDLSRDDCSRCLRLAISPLDGCCSIKIGGRVMYPSCNFRYELYQF 469
            S +++ +  +R  ++N+ N+   S D   +N    A+  AL   + +K     +++Y  S        + +Y++VQCT DLS  +CS CL   +S L  CC  K GG V+ PSCNFRYELY F
Sbjct:  135 SIYTLAEIDYR-HIFNMYNAKDVSSDTMAFNKNTRALLYALKEKAISKKELPYRRDYLYSAGEESLGKKKVYAMVQCTKDLSAKNCSVCLSYILSKLPKCCKGKQGGSVLSPSCNFRYELYPF 256          
BLAST of CX300408 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.892e-13
Identity = 46/118 (38.98%), Postives = 61/118 (51.69%), Query Frame = -2
Query:  134 SFFSVLDTSFRLSLWNVENSPSR--SFDQFVWNS----MNEAVNQALSTTKMFATVKKNYTASQTLYSLVQCTPDLSRDDCSRCLRLAISPLDGCCSIKIGGRVMYPSCNFRYELYQF 469
            SFF  L       + NV++  S    FDQ VW      M  +     S  K +A      TA Q +Y+L+QCTPDLS +DC  CLR ++   + CC+ K GG V   SC FR+EL+ F
Sbjct:  124 SFFGSLKAEPHFYIHNVDDITSNLTEFDQ-VWEELARRMIASTTSPSSKRKYYAADVAALTAFQIIYALMQCTPDLSLEDCHICLRQSVGDYETCCNGKQGGIVYRASCVFRWELFPF 240          
BLAST of CX300408 vs. ExPASy Swiss-Prot
Match: CRR22_ARATH (Putative cysteine-rich repeat secretory protein 22 OS=Arabidopsis thaliana GN=CRRSP22 PE=5 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 8.415e-13
Identity = 38/78 (48.72%), Postives = 48/78 (61.54%), Query Frame = -2
Query:  134 EAVNQALSTTKMFATVKKNYTASQTLYSLVQCTPDLSRDDCSRCLRLAISPLDGCCSIKIGGRVMYPSCNFRYELYQF 367
            E   + L    ++AT +K+    + LY +VQCT DLS  DC  CL   I+ L  CCS K GGRV+  SCNFRYELY+F
Sbjct:  200 EIGGKRLGMKMLYATGEKSLRTMK-LYGMVQCTKDLSIKDCIVCLNWIIAKLPTCCSNKQGGRVLSTSCNFRYELYRF 276          
BLAST of CX300408 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.435e-12
Identity = 31/73 (42.47%), Postives = 47/73 (64.38%), Query Frame = -2
Query:  134 ALSTTKMFATVKKNYTASQTLYSLVQCTPDLSRDDCSRCLRLAISPLDGCCSIKIGGRVMYPSCNFRYELYQF 352
            +   ++ +A  + N T SQ +Y+L+QCTPD+S  +C+ CL+ ++    GCC  K GG V  PSC FR++LY F
Sbjct:  178 SFDNSRFYAADETNLTNSQMVYALMQCTPDVSPSNCNTCLKQSVDDYVGCCHGKQGGYVYRPSCIFRWDLYPF 250          
BLAST of CX300408 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.875e-12
Identity = 37/101 (36.63%), Postives = 53/101 (52.48%), Query Frame = -2
Query:  107 VWNSMNEAVNQALSTTKMFATVKKNYTASQT--------LYSLVQCTPDLSRDDCSRCLRLAISPLDGCCSIKIGGRVMYPSCNFRYELYQFYNDTSNGTL 385
            +W  +   +  A ST K   +   N+ ++ +        +Y+L+QCTPDLS  DC  CLR +      CCS K GG VM PSC  R++LY + N   N T+
Sbjct:  157 IWEGLMGRMISAASTAKSTPSSSDNHYSADSAVLTPLLNIYALMQCTPDLSSGDCENCLRQSAIDYQSCCSQKRGGVVMRPSCFLRWDLYTYSNAFDNLTV 257          
BLAST of CX300408 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.198e-12
Identity = 31/70 (44.29%), Postives = 44/70 (62.86%), Query Frame = -2
Query:  128 KMFATVKKNYTASQTLYSLVQCTPDLSRDDCSRCLRLAISPLDGCCSIKIGGRVMYPSCNFRYELYQFYN 337
            K F   + +  + QTL+ LVQCTPD+S +DCS CL   I+ +  CC +K+G  VM PSC   Y  ++FY+
Sbjct:  177 KNFVVGETSGPSFQTLFGLVQCTPDISEEDCSYCLSQGIAKIPSCCDMKMGSYVMSPSCMLAYAPWRFYD 246          
BLAST of CX300408 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 7.124e-12
Identity = 31/76 (40.79%), Postives = 45/76 (59.21%), Query Frame = -2
Query:  110 KMFATVKKNYTASQTLYSLVQCTPDLSRDDCSRCLRLAISPLDGCCSIKIGGRVMYPSCNFRYELYQFYNDTSNGT 337
            K FA    + T  QT+Y+++QCTPD+S  DC  CL+ ++   + CC  K GG V+ PSC  R++LY +     N T
Sbjct:  179 KYFAAEVASLTTFQTMYAMMQCTPDVSSKDCEFCLKTSVGDYESCCRGKQGGAVIRPSCFVRWDLYPYAGAFENVT 254          
The following BLAST results are available for this feature:
BLAST of CX300408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
CRK19_ARATH1.812e-1539.17Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRR38_ARATH1.174e-1441.74Cysteine-rich repeat secretory protein 38 OS=Arabi... [more]
CRK23_ARATH2.003e-1437.50Putative cysteine-rich receptor-like protein kinas... [more]
CRR25_ARATH1.696e-1335.77Putative cysteine-rich repeat secretory protein 25... [more]
CRK14_ARATH2.892e-1338.98Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
CRR22_ARATH8.415e-1348.72Putative cysteine-rich repeat secretory protein 22... [more]
CRK30_ARATH1.435e-1242.47Putative cysteine-rich receptor-like protein kinas... [more]
CRK11_ARATH1.875e-1236.63Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
CRK26_ARATH3.198e-1244.29Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
CRK35_ARATH7.124e-1240.79Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC07009H08SK SaltLeaf1 Citrus clementina cDNA clone C07009H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300408 ID=CX300408; Name=CX300408; organism=Citrus clementina; type=EST; length=470bp
ATCAAATTTGATGTTAATTTCTAACGTGAAGAATGAAATTCGAAATTAGT
TTACCTTTAGAGCTTGTTACAGAACCAGGAGACGGCGGAGAAAAAAACAC
AGGCGGCAGTGTCCCGTTCGACGTATCATTATAAAACTGGTACAGCTCAT
ATCGGAAGTTGCAACTGGGATACATCACTCTTCCTCCTATCTTAATGCTA
CAGCATCCATCCAAGGGTGAAATAGCTAAACGAAGACATCTGCTACAGTC
ATCTCTAGACAAGTCCGGCGTGCACTGAACGAGGCTGTATAGCGTTTGAG
AGGCTGTATAATTTTTCTTTACCGTAGCAAACATTTTGGTGGTACTTAGA
GCCTGATTTACTGCTTCGTTCATCGAATTCCACACGAACTGGTCAAATGA
CCGACTTGGAGAATTTTCTACATTCCATAGGGAGAGTCTGAACGAGGTGT
CCAGGACTGAAAAGAAAGAA
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