CX300408

Overview
NameCX300408
Unique NameCX300408
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length470
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300408 vs. ExPASy Swiss-Prot
Match: CRR24_ARATH (Putative cysteine-rich repeat secretory protein 24 OS=Arabidopsis thaliana GN=CRRSP24 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 9.304e-12
Identity = 31/53 (58.49%), Postives = 39/53 (73.58%), Query Frame = -2
Query:  134 LYSLVQCTPDLSRDDCSRCLRLAISPLDGCCSIKIGGRVMYPSCNFRYELYQF 292
            LY++VQCT DLS  +C+ CL   ++ L  CC+ K GGRV+ PSCNFRYELY F
Sbjct:  207 LYAMVQCTQDLSLKNCTVCLDWIMTKLPECCNGKQGGRVLSPSCNFRYELYPF 259          
BLAST of CX300408 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.587e-11
Identity = 30/69 (43.48%), Postives = 41/69 (59.42%), Query Frame = -2
Query:  107 NYTASQTLYSLVQCTPDLSRDDCSRCLRLAISPLDGCCSIKIGGRVMYPSCNFRYELYQFYNDTSNGTL 313
            N T  Q +Y+L+QCTPD+S D+C+ CL+  +     CC    GG VM P C FR++L+ F     N TL
Sbjct:  191 NLTKFQNIYALMQCTPDISSDECNNCLQRGVLEYQSCCGNNTGGYVMRPICFFRWQLFTFSKAFHNITL 259          
BLAST of CX300408 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.587e-11
Identity = 30/69 (43.48%), Postives = 41/69 (59.42%), Query Frame = -2
Query:  107 NYTASQTLYSLVQCTPDLSRDDCSRCLRLAISPLDGCCSIKIGGRVMYPSCNFRYELYQFYNDTSNGTL 313
            N T  Q +Y+L+QCTPD+S D+C+ CL+  +     CC    GG VM P C FR++L+ F     N TL
Sbjct:  191 NLTKFQNIYALMQCTPDISSDECNNCLQRGVLEYQSCCGNNTGGYVMRPICFFRWQLFTFSKAFHNITL 259          
BLAST of CX300408 vs. ExPASy Swiss-Prot
Match: CRR21_ARATH (Putative cysteine-rich repeat secretory protein 21 OS=Arabidopsis thaliana GN=CRRSP21 PE=5 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 2.707e-11
Identity = 34/82 (41.46%), Postives = 48/82 (58.54%), Query Frame = -2
Query:  134 NSMNEAVNQALSTTKMFATVKKNYTASQTLYSLVQCTPDLSRDDCSRCLRLAISPLDGCCSIKIGGRVMYPSCNFRYELYQF 379
            + + E  N       M+A  +K     + LY++VQCT DL+ ++C+ CL   ++ L  CC  K GGRV+  SCNFRYELY F
Sbjct:  173 HELKEKANIKSKKDFMYAAGEKGL-GEKKLYAMVQCTKDLTPNNCNVCLNWIMAKLPKCCKGKQGGRVLSTSCNFRYELYPF 253          
BLAST of CX300408 vs. ExPASy Swiss-Prot
Match: CRR10_ARATH (Putative cysteine-rich repeat secretory protein 10 OS=Arabidopsis thaliana GN=CRRSP10 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.707e-11
Identity = 38/95 (40.00%), Postives = 51/95 (53.68%), Query Frame = -2
Query:  134 ENSPSRSFDQFVWNSMNEAVNQALSTTKMFATVKKNYTASQTLYSLVQCTPDLSRDDCSRCLRLAISPLDGCCSIKIGGRVMYPSCNFRYELYQF 418
            E +  +  + +  + M  A  ++L TTK              LY ++QCT DLS  +CS CL   I+ L  CC+ K GGRV+ PSC FRYELY F
Sbjct:  172 EKAIRKEQEPYTRDYMYAAGEESLGTTK--------------LYGMMQCTQDLSVKNCSVCLDSIIAKLPRCCNGKQGGRVLNPSCTFRYELYPF 252          
BLAST of CX300408 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 7.876e-11
Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = -2
Query:  134 VWNSMNEA-VNQALSTTKMFATVKKNYTA-------SQTLYSLVQCTPDLSRDDCSRCLRLAISPLDGCCSIKIGGRVMYPSCNFRYELYQF 385
            VW+ + +  V +A S+T    +  K YTA       SQTLY+++QCTPDLS  +C+ CL  ++     CC  + GG ++  SC FR ELY F
Sbjct:  152 VWSRLTQRMVQEASSSTDATWSGAKYYTADVAALPDSQTLYAMMQCTPDLSPAECNLCLTESVVNYQSCCLGRQGGSIVRLSCAFRAELYPF 243          
The following BLAST results are available for this feature:
BLAST of CX300408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
CRR24_ARATH9.304e-1258.49Putative cysteine-rich repeat secretory protein 24... [more]
CRK22_ARATH1.587e-1143.48Cysteine-rich receptor-like protein kinase 22 OS=A... [more]
CRK13_ARATH1.587e-1143.48Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
CRR21_ARATH2.707e-1141.46Putative cysteine-rich repeat secretory protein 21... [more]
CRR10_ARATH2.707e-1140.00Putative cysteine-rich repeat secretory protein 10... [more]
CRK12_ARATH7.876e-1140.22Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC07009H08SK SaltLeaf1 Citrus clementina cDNA clone C07009H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300408 ID=CX300408; Name=CX300408; organism=Citrus clementina; type=EST; length=470bp
ATCAAATTTGATGTTAATTTCTAACGTGAAGAATGAAATTCGAAATTAGT
TTACCTTTAGAGCTTGTTACAGAACCAGGAGACGGCGGAGAAAAAAACAC
AGGCGGCAGTGTCCCGTTCGACGTATCATTATAAAACTGGTACAGCTCAT
ATCGGAAGTTGCAACTGGGATACATCACTCTTCCTCCTATCTTAATGCTA
CAGCATCCATCCAAGGGTGAAATAGCTAAACGAAGACATCTGCTACAGTC
ATCTCTAGACAAGTCCGGCGTGCACTGAACGAGGCTGTATAGCGTTTGAG
AGGCTGTATAATTTTTCTTTACCGTAGCAAACATTTTGGTGGTACTTAGA
GCCTGATTTACTGCTTCGTTCATCGAATTCCACACGAACTGGTCAAATGA
CCGACTTGGAGAATTTTCTACATTCCATAGGGAGAGTCTGAACGAGGTGT
CCAGGACTGAAAAGAAAGAA
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