CX300422
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.679e-16 Identity = 52/123 (42.28%), Postives = 65/123 (52.85%), Query Frame = 2 Query: 95 SVTDLVTPEFFDG-IKNQAPATCEGKGFYTRDAFITALNSYPEFGRT--DT--KREVAAFFAHVTHETT------------DFCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNY 412 +V +VT + FD +KN+ A C FYT DAFI A NS+P FG T DT K+E+AAFF +HETT +C++ E N+ G YYGRGPIQLTG NY Sbjct: 25 NVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGTLSPDGPYAGGYCFLREGNQM-------------GNGYYGRGPIQLTGQSNY 134
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.310e-15 Identity = 47/125 (37.60%), Postives = 66/125 (52.80%), Query Frame = 2 Query: 98 VTDLVTPEFFDGI-KNQAPATCEGKGFYTRDAFITALNSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCYIEEKNKADPHC--TSPQYPCANGKFYYGRGPIQLTGNGNY 412 V+ +V+ + + + ++ A C +GFYT +F+ A +P F T KREVAAF A ++HETT CY EE N +C T Q+PC GK Y+GRGPIQ++ N NY Sbjct: 49 VSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNY 173
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.711e-15 Identity = 48/125 (38.40%), Postives = 68/125 (54.40%), Query Frame = 2 Query: 95 SVTDLVTPEFFDGIK-NQAPATCEGKGFYTRDAFITALNSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNY 412 +V +V+ E F+ + ++ A C +GFYT DA +TA ++P+F T KREVAAF +HETT +C+ EE +C S ++PCA K Y+GRGPIQL+ N NY Sbjct: 85 AVEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPSAEWPCAPDKKYFGRGPIQLSYNYNY 209
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.234e-15 Identity = 51/123 (41.46%), Postives = 65/123 (52.85%), Query Frame = 2 Query: 98 VTDLVTPEFFDG-IKNQAPATCEGKGFYTRDAFITALNSYPEFGRTD-----TKREVAAFFAHVTHETT------------DFCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNY 412 V ++T F+ + N+ + C +GFYT DAFI A NS+P FG + +RE+AAFF +HETT +C+ EE NKA TSP YYGRGPIQLTG NY Sbjct: 32 VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGGTRGSSDQFQWGYCFKEEINKA----TSPP--------YYGRGPIQLTGQSNY 142
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.109e-14 Identity = 46/121 (38.02%), Postives = 64/121 (52.89%), Query Frame = 2 Query: 98 VTDLVTPEFFDG-IKNQAPATCEGKGFYTRDAFITALNSYPEFGRT--DT--KREVAAFFAHVTHETT-----------DFCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNY 412 + +VT + F+ +KN+ C GFYT DAFI A NS+P FG T DT ++E+AAFF +HETT +C++ + +++D YYGRGPIQLT NY Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAEPFTGGYCFVRQNDQSDR--------------YYGRGPIQLTNRNNY 133
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.226e-14 Identity = 44/121 (36.36%), Postives = 62/121 (51.24%), Query Frame = 2 Query: 98 VTDLVTPEFFDG-IKNQAPATCEGKGFYTRDAFITALNSYPEFGR----TDTKREVAAFFAHVTHETT-----------DFCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNY 412 + +VT + F+ +KN+ C GFYT DAFI A NS+P FG T ++E+AAFF +HETT +C++ + +++D YYGRGPIQLT NY Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAEPFTGGYCFVRQNDQSDR--------------YYGRGPIQLTNQNNY 133
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.226e-14 Identity = 48/115 (41.74%), Postives = 59/115 (51.30%), Query Frame = 2 Query: 134 IKNQAPATCEGKGFYTRDAFITALNSYPEFGRT---DT-KREVAAFFAHVTHETT-------------DFCYIEEKNKADPHC---TSPQYPCANGKFYYGRGPIQLTGNGNYIE 418 + N+ +C GKGFYT DA+ A YP FG T DT KRE+AAFFA + ET+ +C + E N +C T YPC YYGRGP+QL N NY E Sbjct: 76 LPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCVAD--YYGRGPLQLRWNYNYGE 188
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.187e-14 Identity = 45/117 (38.46%), Postives = 64/117 (54.70%), Query Frame = 2 Query: 98 VTDLVTPEFFDG-IKNQAPATCEGKGFYTRDAFITALNSYPEFGRT---DT-KREVAAFFAHVTHETTD------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNY 412 V +VT + F+ + ++ A C +GFY AF+ A ++P F T DT KREVAAF A +H T+ +CY E K C + ++PCA GK Y+ RGP+Q+ N NY Sbjct: 97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATSGGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNY 213
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.187e-14 Identity = 45/117 (38.46%), Postives = 64/117 (54.70%), Query Frame = 2 Query: 98 VTDLVTPEFFDG-IKNQAPATCEGKGFYTRDAFITALNSYPEFGRT---DT-KREVAAFFAHVTHETTD------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNY 412 V +VT + F+ + ++ A C +GFY AF+ A ++P F T DT KREVAAF A +H T+ +CY E K C + ++PCA GK Y+ RGP+Q+ N NY Sbjct: 97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATSGGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNY 213
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.659e-13 Identity = 46/116 (39.66%), Postives = 62/116 (53.45%), Query Frame = 2 Query: 107 LVTPEFFDGIKN-QAPATCEGKGFYTRDAFITALNSYPEFGRT--DT--KREVAAFFAHVTHETT---------DFCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNY 412 +VT E F+ + + + C KGFYT DAFI A NS+P FG T DT K+E+AAFF +HET +C++ + +++D YYGRGPIQLT NY Sbjct: 30 IVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGGSAGTFTGGYCFVRQIDQSDR--------------YYGRGPIQLTHQSNY 131 The following BLAST results are available for this feature:
BLAST of CX300422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300422 ID=CX300422; Name=CX300422; organism=Citrus clementina; type=EST; length=418bpback to top |