CX300422
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 4.659e-13 Identity = 48/136 (35.29%), Postives = 64/136 (47.06%), Query Frame = 2 Query: 68 IPGNVVCQNSVTDLVTPEFFDGIKNQAPATCEGKGFYTRDAFITALNSYPEFGR----TDTKREVAAFFAHVTHETTDFCYIEEKNKADPH-----------------CTSPQYPCANGKFYYGRGPIQLTGNGNY 412 + GN + +VT FD + + C +GFY+ +F+ A S+P FG KREVAAF AH++ T+ E + +PH CTS +PCA GK Y RGPIQLT N NY Sbjct: 120 LSGNSTANSIGNVVVTEPLFDQMFSHRK-DCPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSG----ERSDVENPHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNY 250
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.947e-13 Identity = 44/116 (37.93%), Postives = 60/116 (51.72%), Query Frame = 2 Query: 107 LVTPEFFDGIKN-QAPATCEGKGFYTRDAFITALNSYPEFGR----TDTKREVAAFFAHVTHETT---------DFCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNY 412 +VT E F+ + + + C KGFYT DAFI A NS+P FG T K+E+AAFF +HET +C++++ ++D YYGRGPIQLT NY Sbjct: 30 IVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGGSAGTFTGGYCFVKQIEQSDR--------------YYGRGPIQLTHQSNY 131
BLAST of CX300422 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.438e-11 Identity = 44/126 (34.92%), Postives = 58/126 (46.03%), Query Frame = 2 Query: 89 QNSVTDLVTPEFFDG-IKNQAPATCEGKGFYTRDAFITALNSYPEFGRTDT----KREVAAFFAHVTHETT-------------DFCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNY 412 Q V ++T F+ + ++ C+G FYT DAFI A +P FG T +RE+AAFF +HETT +C + E +DP YYGRGPIQLT NY Sbjct: 24 QAGVGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPSDPP-------------YYGRGPIQLTHKYNY 135 The following BLAST results are available for this feature:
BLAST of CX300422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300422 ID=CX300422; Name=CX300422; organism=Citrus clementina; type=EST; length=418bpback to top |